Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2836 89.7 4e-13 >seq2836 Length=15749 Score = 89.7 bits (98), Expect = 4e-13 Identities = 200/300 (67%), Gaps = 3/300 (1%) Strand=Plus/Plus Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674 || ||||| |||||||| ||||||| || || |||||||| || | || |||||| Sbjct 8927 GGGCACATGAGCGACCAGTCGCCGTTGGCCTCGACGCGCTTCATGAAGAGGTCAGGCACC 8986 Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAA 131734 || | ||||| || || || | || ||| || | || | | || |||| Sbjct 8987 CAGAGAGCGTAGAAGAGGTCGCGCGCGCGCGCCTCCTCCTTGCCGTGATTCTTCTTCAGG 9046 Query 131735 TTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTG 131794 | | |||||| | | |||||||||||| || || | ||||| || | ||||| ||| Sbjct 9047 TCAAGAAAGTCGCACACGTCCGCATGCCATGGCTCGAGGTACACGGCGAAGGCGCCCTTG 9106 Query 131795 CGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGC 131851 ||||| ||||| || | || | || | |||||| ||| ||||||| |||||| Sbjct 9107 CGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCAGTGTTGTCGTACACGCGCAGCATGGGA 9166 Query 131852 TCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTG 131911 | | |||||| | || |||| ||| ||||| ||| ||||| | ||| ||| Sbjct 9167 ACGAGGCCGTTGCTCGTGCCGCCCGTGCCCTTGATGTACGAGCCCTTGGCGCGGATGTTG 9226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424916729634144