Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2836 93.3 1e-13 seq2059 89.7 2e-12 >seq2836 Length=15749 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 256135 GCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCACCGCTCAAAT 256194 |||||| || |||||||||| | | ||||||||||| ||||| || || || || Sbjct 8206 GCACGGGCTACGCAACTCGCTGCTGCTCGCGCCCATGCCCACCGCGTCGACGGCGCAGAT 8147 Query 256195 CCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGCGCCGCGTTCG 256254 |||||| ||| || || |||| || || ||||| | | ||| |||||||| | Sbjct 8146 CCTGGGCAACAACGAGTGCTTCGAGCCGTACACGTCCAACCTGTACTCTCGCCGCGTACT 8087 Query 256255 CTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTG 256300 | | ||||||||||| ||||| |||||| || || || |||| || Sbjct 8086 CGCTGGCGAGTTCGCGGTGGTCAACCAGCACCTGTTGCGCGACCTG 8041 >seq2059 Length=13280 Score = 89.7 bits (98), Expect = 2e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 256125 AGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCA 256184 |||| | || |||||| || |||||||||| | | ||||||||||| ||||| | Sbjct 5601 AGATTGCGGTGCACGGGCTACGCAACTCGCTGCTCGTCGCGCCCATGCCCACCGCGTCGA 5542 Query 256185 CCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGC 256244 | || || |||||||| ||| || || |||| || || ||||| | | ||||| Sbjct 5541 CAGCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCATACACGTCCAACCTTTACTCGC 5482 Query 256245 GCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTG 256288 ||||||| |||||||||||| | || || |||||| || || Sbjct 5481 GCCGCGTGTTGTCCGGCGAGTTCACGGTCGTTAACCAGCACCTG 5438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588266563906340