Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq3345 796 0.0 >seq3345 Length=67807 Score = 796 bits (882), Expect = 0.0 Identities = 780/1004 (78%), Gaps = 14/1004 (1%) Strand=Plus/Minus Query 176104 TGGGAGCAGTTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTT 176163 |||||||| || ||| ||| |||| || | |||||| | ||| |||||||||| Sbjct 46425 TGGGAGCAATTCTGCGCATGGATCACTTCAACTGAGAACAGACTATACATTGGTTGGTTC 46366 Query 176164 GGTGTGCTCATGATTCCATGTCTGCTCACTGCTG---CAGCATGTTTTATCGTTGCATTT 176220 ||| || ||| | || ||| || || ||| |||| | |||| ||| ||| Sbjct 46365 GGTTGTCTAATGTTCCCTACTCTACTTACAGCTATTTCAGCTTACGTTAT---TGCTTTT 46309 Query 176221 ATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTC 176280 || |||||||| || || |||||||| ||||| || || ||||| || || |||||||| Sbjct 46308 ATCGCAGCACCTCCAGTAGATATCGATGGTATCCGTGAGCCAGTTGCTGGTTCTCTACTT 46249 Query 176281 TATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACAC 176340 || ||||||||||||||||| || || || || ||||| |||||||| ||||| | ||| Sbjct 46248 TACGGAAACAACATCATCTCTGGTGCTGTAGTTCCAAGTTCAAACGCTATCGGTGTTCAC 46189 Query 176341 TTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATAC 176400 |||||||||||||||||||| || || | || || ||||| ||||| || || | ||| Sbjct 46188 TTCTACCCAATCTGGGAAGCTGCTTCAATCGATGAGTGGCTATACAACGGTGGTACTTAC 46129 Query 176401 CAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATGGGAA 176460 ||||| ||||| ||||||||| | || ||| | | |||||||| || || | ||||| Sbjct 46128 CAACTAGTTGTTTTCCACTTCTTCATTGGTGTATGTGCTTACATCGGTCGTGAGTGGGAG 46069 Query 176461 CTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCT 176520 ||| |||| | ||||| |||||||| |||||||||||||| | ||| || |||||| || Sbjct 46068 CTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTTCTCAGCTCCAGTAGCT 46009 Query 176521 GCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATG 176580 ||||| ||||| ||| | |||| ||| |||||||||| |||||||| ||||||||| Sbjct 46008 GCAGCATCTGCAGTATTCGTAATCTACCCAATCGGTCAAGGTTCTTTCTCAGATGGTATG 45949 Query 176581 CCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATT 176640 ||||| || || || ||||| |||||||| ||| ||||||||||||| ||||||||||| Sbjct 45948 CCTCTAGGTATCTCTGGTACTTTCAACTTCATGCTTGTATTCCAAGCTGAGCACAACATC 45889 Query 176641 CTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCA 176700 || |||||||||||||| |||||||| || || ||||| || ||||| ||||| |||||| Sbjct 45888 CTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCTCTATTCTCA 45829 Query 176701 GCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCA 176760 || |||||||| ||| || ||||| || || | | || || || || |||||||| Sbjct 45828 GCTATGCACGGTTCTCTAGTAACTTCATCTCTAATCCGTGAAACTACTGAGAACGAATCT 45769 Query 176761 CAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACAC 176820 |||||||||||||| ||||| |||||||||||||| |||||||| || || || ||| Sbjct 45768 GCTAACTACGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATCGTTGCAGCTCAC 45709 Query 176821 GGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCAC 176880 |||||||| |||||||| ||||||| || ||||| ||||| |||||| | |||||| Sbjct 45708 GGTTACTTAGGTCGTCTATTCTTCCAATACGCTTCATTCAACAACTCACGTGCACTTCAC 45649 Query 176881 TTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACA 176940 ||| |||| | || | ||||| ||| | |||||||| || | |||||||| || Sbjct 45648 TTCGTCCTAGGTGCTTGGCCAGTAGTTGGTATCTGGTTAACATCTATGGGTGTAGCTACT 45589 Query 176941 ATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAG----ACAACTCTGG 176996 |||||||||||||| ||||||||||||||||||||||| || ||| |||| || Sbjct 45588 ATGGCATTCAACCTAAACGGTTTCAACTTCAACCAGTCAGTTGTAGATTCACAA----GG 45533 Query 176997 TAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTAT 177056 | || || || |||| || || ||||||||| ||||||| |||||||||||||| Sbjct 45532 TCGTGTAATCAACACTTGGGCTGACATTCTTAACCGTTCAAACCTAGGTATGGAAGTTAT 45473 Query 177057 GCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 |||||||||||| |||||||||||||| || || || ||||||| Sbjct 45472 GCACGAGCGTAACGCTCACAACTTCCCTCTAGATCTAGCTGCTG 45429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603468660963840