Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2059 100 4e-16 >seq2059 Length=13280 Score = 100 bits (110), Expect = 4e-16 Identities = 367/575 (64%), Gaps = 0/575 (0%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 || ||||||||||| ||||| | || ||||| || | | ||| || |||||||| Sbjct 6291 CCCGGGCATTCATTGGGGCAGAGCAGCGACCACTCGGCGTTGGCCTCGACACGTTTCATG 6350 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 ||||| || || | ||| || || || || || || | | ||||| || || Sbjct 6351 AAGAGGTCGGGCACCCAGAGCGCGTAGAAGAGGTCACGCGCGCGCGCCTCTTCCTTGCCG 6410 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||||| |||||||| || | | || || ||||| || || || || | Sbjct 6411 TGGTTCTTTTTGAGATCGAGGAAGGCGAAGATGTCTCCGTGCCACGGCTCGAGGTACACG 6470 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | || | || || ||| ||||| | | | || ||||| || | Sbjct 6471 GCGAACGAGCCCTGCCGCTTGCCACCGCCCTGCGAAACGAAGCGCGCCGTGTTGTTGAAG 6530 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | || ||| || || | || || || || || || || || ||| || ||||| Sbjct 6531 ACGCGCAGCATCGGGATGAGCCCATTGGAGGTGCCGTTGGTACCGCGAATGTAGCTTCCC 6590 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 || |||||||| || | || || | || || ||| ||| || || || ||| Sbjct 6591 GACGCACGAATATTGCTCGCGCTGATTCCAACGCCACCCGCCGCCTTCGAGATGAGCGCG 6650 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 || || |||| || ||||||| ||||| || ||| |||| |||| || || || Sbjct 6651 CACCGCTTCAGCGTGGCGTAGATGCCCTCGATGGAGTCGTCCACCATGGAGAGGAGGAAG 6710 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || ||||| || | | || || || || || | ||||| || || ||||| Sbjct 6711 CACGACGACATCTGCGGCTTGGGCGTGCCCGCGTTGAACATGGTCGGCGAGGCGTGCGTG 6770 Query 78435 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGA 78494 ||||| | || || | || | || || ||||| || | || ||||| | | || Sbjct 6771 AACCACCTCTCTGACATGAGCGTATACGTCTCAATCGCCGCCTCGATGTCGCTGAGGTGG 6830 Query 78495 ATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529 || || | ||| || ||||||||||| |||||||| Sbjct 6831 ATGCCAAGCGCCACGCGCATCAACATGTGCTGAGG 6865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694639172375680