Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochromulina_20sp._20CCMP291_20[genbank_20GCA_5F001275005.1_2020 15-08-26] 3,412 sequences; 59,073,094 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq3385 80.6 1e-10 >seq3385 Length=98159 Score = 80.6 bits (88), Expect = 1e-10 Identities = 131/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 31067 AGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATG 31126 || ||||| || ||||| ||||||||||| ||||||| ||||| ||||| || ||| | Sbjct 60326 AGCGCGTCGGCAATCTGTTCTGTGAGCCGCTCCTGCATCTGCAGCCGGCGCGCGCACACG 60267 Query 31127 TCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGATC 31186 ||||||| ||| | | ||| ||||| | | | | || || | ||||| ||| Sbjct 60266 TCCGCCACGCGCGCAAACTTCGAGAGGCCAAGCACAGCGCGGTCGGGCAGGTAGCCGAT- 60208 Query 31187 GTG--ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGT 31244 ||| |||| |||| | | || ||||| |||||||| |||| ||| |||||| Sbjct 60207 GTGGCACCG-GCCGTAAAAGGGTAGCAGGTGGTGCTCGCACAAGGAGTTGATTCGGATGT 60149 Query 31245 CGCGC 31249 ||||| Sbjct 60148 CGCGC 60144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187282011493632