Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq4 262 4e-65 seq3 104 2e-17 seq20 95.1 1e-14 seq5 93.3 4e-14 >seq4 Length=2624409 Score = 262 bits (290), Expect = 4e-65 Identities = 422/601 (70%), Gaps = 4/601 (1%) Strand=Plus/Plus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 |||||||| ||||| ||||| | ||||| || || |||| || || |||| ||||| Sbjct 1028819 GAGAACCCTCGCCGTTTCGTTCTCTTCCCTATCCAGTACCAAGAGATCTGGCAGATGTAT 1028878 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710 || || || || ||||| |||||||| || ||||| ||||| || || || | | Sbjct 1028879 AAGAAAGCAGAAGCGTCCTTCTGGACTGTTGAGGAAGTGGATCTCTCACGTGATCTGGCC 1028938 Query 116711 GACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTC 116770 |||||||| | || ||| |||| |||||| | ||||| || || || || Sbjct 1028939 GACTGGGACAATCTTAAGGACGGCGAGAAACATTTCTTGTCTCACGTTCTTGCGTTCTTT 1028998 Query 116771 GCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG-GAGGTGCA 116829 |||||||| || ||||| |||||||| ||||| | || | ||| | ||| |||||||| Sbjct 1028999 GCCGCCAGTGATGGCATTGTCAACGAAAATCTTTTGGACAGGTTCTC-CAGTGAGGTGCA 1029057 Query 116830 GGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGA 116889 | | ||||||| || || |||||||| || ||||| || || || || | ||||| || Sbjct 1029058 GATCCCCGAGGCTCGCTGTTTCTACGGTTTCCAGATTGCTATCGAAAATATTCACTCCGA 1029117 Query 116890 AATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTT 116949 ||||||||| || ||||| || || || || || | || ||||| | | || Sbjct 1029118 AATGTATTCTACTCTCATTGAAACATATGTTCGTGATCCGTTTCAGAAGGATCACCTCTT 1029177 Query 116950 GAACGCCATCGAGACGATGCCGTGC-GTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGA 117008 ||||| |||||||| | || ||| || || | |||||||| ||||| || |||| Sbjct 1029178 CAACGCTATCGAGACACTTCC-TGCTGTAAAGAAAAAGGCCGACTGGGCTCTTAAGTGGA 1029236 Query 117009 TCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCG 117068 | || || | | ||||| || ||| | || ||||| || ||||| ||||| Sbjct 1029237 TTAACGATGAGGAATCAACTTTCGGTGAACGCATTGTTGCCTTTGCCGCCGTTGAGGGTA 1029296 Query 117069 TCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCG 117128 ||||||| || || ||| || | || |||||| | ||||| || || |||||||| | Sbjct 1029297 TCTTCTTCTCTGGTTCTTTTGCTTCTATCTTTTGGATGAAGAAGCGTGGTCTCATGCCTG 1029356 Query 117129 GCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCT 117188 | || || || |||||||||||| ||||||| ||||| || ||||| || |||| Sbjct 1029357 GACTAACATTTTCTAACGAGCTCATCAGTCGGGACGAAGGTCTTCACTGCGATTTCGCCT 1029416 Query 117189 G 117189 | Sbjct 1029417 G 1029417 >seq3 Length=3052702 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || ||||| || ||||| || || | || || || | Sbjct 339777 AATATGCAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCT 339836 Query 40747 ACCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | || |||| | |||| || |||| ||||||||||| || || |||| Sbjct 339837 AGTGACACGATTGATAACG-TGAAGGCTAAGATTCAGGACAAAGAGGGTATTCCTCCGGA 339895 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 || ||||| || |||| || || || ||||| || || | || || ||| ||| || Sbjct 339896 TCAACAACGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATTA 339955 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| || ||||||||| | || |||||||||| | || ||| | ||||| Sbjct 339956 CAATATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGG 340006 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || || | || || ||||| ||||| | || ||||| ||| Sbjct 340236 ATGCAAATATTTGTGAAGACTTTGACCGGTAAAACAATCACATTAGATGTCGAGTCCAGT 340295 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || |||| | |||| ||| || | |||||||||||||| || | || || Sbjct 340296 GACACTATTGATAACG-TGAAGGCAAAGATCCAAGACAAAGAGGGCATTCCTCCTGATCA 340354 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||| | || || || |||||||| || | ||||| ||| || || || Sbjct 340355 ACAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGATGGACGCACTCTCGCTGATTATAA 340414 Query 40869 CATCCAGAAGGAGGCCAC 40886 || ||||||||| |||| Sbjct 340415 TATTCAGAAGGAGTCCAC 340432 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || || | || || || ||||| || | ||||| || | | Sbjct 340008 ATGCAAATATTTGTCAAGACATTGACTGGTAAGACCATTACATTGGACGTTGAGTCTAGT 340067 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| | || | || |||| ||||| |||||||| || | || || Sbjct 340068 GACACGATTGATAACG-TGAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCA 340126 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || || ||||| || || || | || || || ||| ||||| Sbjct 340127 GCAGCGTCTTATTTTTGCTGGAAAACAACTAGAGGATGGCCGAACACTTGCCGATTACAA 340186 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || ||||||||| | || |||||||||| | || ||| | ||||| Sbjct 340187 TATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGG 340234 >seq20 Length=1052065 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || |||||||| || || || || | || ||||| | | Sbjct 925382 ATGCAGATTTTTGTTAAGACCCTCACGGGTAAGACTATTACTCTTGATGTCGAGTCTAGT 925323 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | || | || || | ||||| || || || ||| |||| ||| Sbjct 925322 GATACCATCGACAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCGGATCAG 925263 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| ||||| |||||||| || | || || || |||||||||| Sbjct 925262 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGAACTCTTGCCGACTACAAC 925203 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| |||| || || | |||||||| Sbjct 925202 ATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCG 925168 >seq5 Length=2516746 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || ||||| || ||||| || || || || ||| | || || || ||| Sbjct 234646 ATGCAGATCTTTGTAAAGACACTCACCGGAAAGACAATTACCCTGGATGTGGAGTCCAGT 234705 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || |||| || || || || || || |||| || Sbjct 234706 GACACTATTGACAACG-TGAAGGCCAAGATTCAAGATAAGGAAGGTATACCTCCGGATCA 234764 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | ||| || || ||||| || || | ||| || || ||||||||| Sbjct 234765 GCAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCCGACTACAA 234824 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| |||| ||||| | || |||| ||| | || || Sbjct 234825 CATTCAGAAGGAGTCCACTCTGCACTTGGTACTGCGTTTGCGAGGTGG 234872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218684780800