Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq3 149 9e-31 seq5 109 8e-19 >seq3 Length=3052702 Score = 149 bits (164), Expect = 9e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | |||||| | || || || || || || | || |||| | | | Sbjct 340008 ATGCAAATATTTGTCAAGACATTGACTGGTAAGACCATTACATTGGACGTTGAGTCTAGT 340067 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || ||||| || || || || || || |||||||| Sbjct 340068 GACACGATTGATAACGTGAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAG 340127 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||||||||| ||||||||| |||||||| | |||||| | | ||||| ||| Sbjct 340128 CAGCGTCTTATTTTTGCTGGAAAACAACTAGAGGATGGCCGAACACTTGCCGATTACAAT 340187 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || |||||||||||| | ||| | ||||| || || ||||| Sbjct 340188 ATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGGTAT 340237 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || |||||||| ||| | || | || | | | Sbjct 339780 ATGCAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCTAGT 339839 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || ||||| || ||||| ||||| || || |||||| Sbjct 339840 GACACGATTGATAACGTGAAGGCTAAGATTCAGGACAAAGAGGGTATTCCTCCGGATCAA 339899 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| ||||| || | || ||| | || || | | ||||| ||| Sbjct 339900 CAACGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATTACAAT 339959 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || |||||||||||| | ||| | ||||| || || ||||| Sbjct 339960 ATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGGTAT 340009 Score = 113 bits (124), Expect = 7e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | ||||| | || || ||||| || || |||| | || | | | Sbjct 340236 ATGCAAATATTTGTGAAGACTTTGACCGGTAAAACAATCACATTAGATGTCGAGTCCAGT 340295 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || ||||| ||||| || || || ||||||||| Sbjct 340296 GACACTATTGATAACGTGAAGGCAAAGATCCAAGACAAAGAGGGCATTCCTCCTGATCAA 340355 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || |||||||| ||||| || | |||||| | || || | | ||||||||| Sbjct 340356 CAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGATGGACGCACTCTCGCTGATTATAAT 340415 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| || || || || || || ||||| | | ||| ||||||| Sbjct 340416 ATTCAGAAGGAGTCCACCTTACACTTGGTACTCAGATTAAGAGGTGG 340462 >seq5 Length=2516746 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| ||||| | |||||||| || || || ||||| || | || | || | | | Sbjct 233962 ATGCAGATATTCGTGAAGACACTCACCGGAAAGACTATCACCCTGGATGTGGAGTCCAGT 234021 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || || ||||||||||| |||||||| || || ||||| Sbjct 234022 GACACCATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 234081 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || ||||| || | |||||| | || || | | || ||||| Sbjct 234082 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTATAAC 234141 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || |||||||| || || | ||||| || |||||||| Sbjct 234142 ATTCAGAAAGAGTCTACTTTGCACTTAGTACTTCGTTTGCGTGGTGGTAT 234191 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| ||||| | ||||| || || ||||| ||||| || | || | || | | | Sbjct 234418 ATGCAGATATTCGTGAAGACGCTTACCGGCAAGACTATCACGCTGGATGTGGAGTCCAGT 234477 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || || ||||||||||| |||||||| || || ||||| Sbjct 234478 GACACCATTGACAACGTGAAGGCTAAGATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 234537 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || ||||| || | |||||| | || || | | || ||||| Sbjct 234538 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTATAAC 234597 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || |||||||| || || | ||||| || |||||||| Sbjct 234598 ATTCAGAAAGAGTCTACTTTGCACTTAGTACTTCGTTTGCGTGGTGGTAT 234647 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||||||||| || || || || || || | || | || | | | Sbjct 234646 ATGCAGATCTTTGTAAAGACACTCACCGGAAAGACAATTACCCTGGATGTGGAGTCCAGT 234705 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || || ||||||||||| ||||||||||| || ||||| Sbjct 234706 GACACTATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATACCTCCGGATCAG 234765 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || ||||| || | |||||| | || || | | || || || Sbjct 234766 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCCGACTACAAC 234825 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || ||| |||| ||||| | ||||| ||||||||||| Sbjct 234826 ATTCAGAAGGAGTCCACTCTGCACTTGGTACTGCGTTTGCGAGGTGGTAT 234875 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||||||||| || || || || || || | || | || | | | Sbjct 234190 ATGCAGATCTTTGTAAAGACACTCACCGGAAAGACAATTACCCTGGATGTGGAGTCCAGT 234249 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || || || |||||||| |||||||| || || ||||| Sbjct 234250 GACACTATTGACAACGTGAAGGCTAAGATCCAAGATAAGGAAGGTATTCCTCCGGATCAG 234309 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || ||||| || | |||||| | || || | | || ||||| Sbjct 234310 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCCGACTATAAC 234369 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || ||| |||| ||||| | ||||| ||||||||||| Sbjct 234370 ATTCAGAAGGAGTCCACTCTGCACTTGGTACTGCGTTTGCGAGGTGGTAT 234419 Score = 104 bits (114), Expect = 4e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| ||||| | ||||| || || ||||| ||||| || | || | || | | | Sbjct 234874 ATGCAGATATTCGTGAAGACGCTTACCGGCAAGACTATCACGCTGGATGTGGAGTCCAGT 234933 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | || || ||||||||||| |||||||| || || ||||| Sbjct 234934 GACACCATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 234993 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | ||||| || ||||| || | |||||| | || || | | || ||||| Sbjct 234994 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTATAAC 235053 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| ||||| || |||||||| || || | ||||| || ||||| Sbjct 235054 ATTCAGAAAGAGTCTACTTTGCACTTAGTACTTCGTTTGCGTGGTGG 235100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455244544000