Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq5 129 5e-25 seq20 116 3e-21 seq3 104 2e-17 >seq5 Length=2516746 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || || | || |||||||| | || ||||| || ||||||||||| ||| Sbjct 234874 TACCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGG 234815 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || ||| |||||| ||||| ||||||||| | || | |||||||||||| |||| Sbjct 234814 CAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234755 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 |||| || ||||| ||| ||| || || || | || | ||||| || ||| | Sbjct 234754 GTATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCA 234695 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || ||||| || || |||||||| |||||||| Sbjct 234694 CATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || || | || |||||||| | || ||||| || |||||||| || ||| Sbjct 234418 TACCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGG 234359 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || ||| |||||| ||||| ||||||||| | || | |||||||||||| |||| Sbjct 234358 CAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234299 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| || || || || | || | ||||| || ||| | Sbjct 234298 GAATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCA 234239 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || ||||| || || |||||||| |||||||| Sbjct 234238 CATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || ||||| | ||||||||||| |||||||| || || | || ||| |||||| Sbjct 234170 ACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCA 234111 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||||||| | || | |||||||||||| ||||| || || ||||| ||| | Sbjct 234110 AGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGA 234051 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| || ||| || || | ||| | || || Sbjct 234050 ATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACATCCAGGGTGATAGTCTTT 233991 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||| || || || || || ||||||||| Sbjct 233990 CCGGTGAGTGTCTTCACGAATATCTGCATG 233961 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || ||||| | ||||||||||| |||||||| || || | || ||| |||||| Sbjct 234626 ACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCA 234567 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||||||| | || | |||||||||||| ||||| || || ||||| ||| | Sbjct 234566 AGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGA 234507 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| || ||| || || | || | || ||| Sbjct 234506 ATCTTAGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTG 234447 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || |||||||| Sbjct 234446 CCGGTAAGCGTCTTCACGAATATCTGCAT 234418 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || ||||| | ||||||||||| |||||||| || || | || ||| |||||| Sbjct 235082 ACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCA 235023 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||||||| | || | |||||||||||| ||||| || || ||||| ||| | Sbjct 235022 AGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGA 234963 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| || ||| || || | || | || ||| Sbjct 234962 ATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTG 234903 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || |||||||| Sbjct 234902 CCGGTAAGCGTCTTCACGAATATCTGCAT 234874 >seq20 Length=1052065 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||||||||| | || || || || || |||||||| ||| | ||| || ||| Sbjct 925170 CAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATC 925229 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || ||||| || || ||| |||| | |||||||||||| || || || || |||||||| Sbjct 925230 TTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCCTTGTC 925289 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || |||||| | |||| ||| || | |||||| || | || | || Sbjct 925290 TTGGATCTTGGCTTTAACATTGTCGATGGTATCACTAGACTCGACATCAAGAGTAATAGT 925349 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || || || || |||||||||||||||||| Sbjct 925350 CTTACCCGTGAGGGTCTTAACAAAAATCTGCATGGCT 925386 >seq3 Length=3052702 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||| ||||||||| | ||| || ||| |||||||| ||||| Sbjct 339976 GTTGACTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTCGAGCTGCTTTCCG 339917 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||| || ||||| ||||| || ||||| ||||| ||| || || Sbjct 339916 GCAAAGATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATCTTAGCCTTC 339857 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | ||| || || | || | ||||| ||||| ||||| Sbjct 339856 ACGTTATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTTTCCGGTGAGAGTC 339797 Query 118722 TTTACAAAAATCTGCAT 118738 || |||||||||||||| Sbjct 339796 TTAACAAAAATCTGCAT 339780 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||| ||||||||| | || || |||||| || ||||||||| Sbjct 340204 GTTGACTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCTAGTTGTTTTCCA 340145 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || |||||||||||||| ||||| |||||||||||||| ||| || ||| Sbjct 340144 GCAAAAATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCTTTC 340085 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | ||| || || | || | || || || |||| || Sbjct 340084 ACGTTATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTACCAGTCAATGTC 340025 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| || ||||| Sbjct 340024 TTGACAAATATTTGCAT 340008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829977015360