Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 2e-13 seq3 89.7 8e-13 seq2 89.7 8e-13 >seq5 Length=2516746 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127 ||| || || |||||||| ||||| || ||||| || | ||| || | | ||| || Sbjct 234171 TACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTC 234112 Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | || |||||||| |||||||| | ||||||||||||||||| ||||| |||||||| Sbjct 234111 AAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTG 234052 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127 ||| || || |||||||| ||||| || ||||| || | ||| || | | ||| || Sbjct 234627 TACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTC 234568 Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | || |||||||| |||||||| | ||||||||||||||||| ||||| |||||||| Sbjct 234567 AAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTG 234508 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127 ||| || || |||||||| ||||| || ||||| || | ||| || | | ||| || Sbjct 235083 TACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTC 235024 Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | || |||||||| |||||||| | ||||||||||||||||| ||||| |||||||| Sbjct 235023 AAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTG 234964 >seq3 Length=3052702 Score = 89.7 bits (98), Expect = 8e-13 Identities = 154/230 (67%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 ||||||||| | ||| | |||||| ||||| || || || || ||||||||||| | Sbjct 340463 TCCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGC 340404 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||||| | | ||| || | || ||||| |||||||| | | || ||||| ||||| Sbjct 340403 GAGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGG 340344 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTAT--CTGAACTTTCT 146227 ||| || ||||| ||||| ||| | ||| || || Sbjct 340343 AATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGAC--TCG 340286 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || |||| ||||||||||||||| || || || || | ||||||||||| Sbjct 340285 ACATCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 146074 ATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTG 146133 ||| ||||| || || || ||||| ||||| | ||| |||| || ||| |||| ||| Sbjct 340211 ATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCTAGTTG 340152 Query 146134 TTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||||||||||||| | | |||||||| |||||||| || || || || || Sbjct 340151 TTTTCCAGCAAAAATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTG 340098 >seq2 Length=3757272 Score = 89.7 bits (98), Expect = 8e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 ||||| || | |||||||| || || ||||| || | |||||| | || ||| ||| Sbjct 390207 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGGCAAGAGTGCGGCCATCTTCT 390266 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTT 146180 | || |||||||||||||||||||| ||||||||||| || || |||| || Sbjct 390267 AGCTGCTTTCCAGCAAAAATCAATCTCTGCTGATCCGGGGGGATACCTTTTT 390318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743525656473600