Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq5 125 6e-24 seq3 98.7 8e-16 seq20 96.9 3e-15 >seq5 Length=2516746 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||| ||| | | |||||||||||| ||| |||||||||||||||||||||| Sbjct 234872 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCA 234813 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || || || || ||||| ||||| ||||| ||||| || || ||||| Sbjct 234812 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGT 234753 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| ||||| || ||| || ||| || | | |||| | |||||| Sbjct 234752 ATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACA 234693 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| |||||| ||||| || || || ||||| |||||||| ||||| Sbjct 234692 TCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||| ||| | | |||||||||||| ||| ||||||||||||||| |||||| Sbjct 234416 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCA 234357 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || || || || ||||| ||||| ||||| ||||| || || ||||| Sbjct 234356 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234297 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| ||||| || || || ||| || | | |||| | |||||| Sbjct 234296 ATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACA 234237 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| |||||| ||||| || || || ||||| |||||||| ||||| Sbjct 234236 TCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | ||| | | ||| ||||||| || ||| ||||||||||| ||||| Sbjct 234188 CCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCA 234129 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || || || || ||||| ||||| ||||| ||||| || || ||||| Sbjct 234128 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234069 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| ||||| || ||| || ||| || | | | |||| | |||||| Sbjct 234068 ATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACA 234009 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 |||| ||| || ||||| || || || |||||||| || || |||||| || Sbjct 234008 TCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCACGAATATCTGCATGATG 233958 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | ||| | | ||| ||||||| || ||| ||||||||||| ||||| Sbjct 234644 CCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCA 234585 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || || || || ||||| ||||| ||||| ||||| || || ||||| Sbjct 234584 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234525 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| ||||| || ||| || ||| || | | | |||| | |||||| Sbjct 234524 ATACCTTCCTTATCTTGAATCTTAGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACA 234465 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || |||||||| || || |||||||| || || ||||| Sbjct 234464 TCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234418 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | ||| | | ||| ||||||| || ||| ||||||||||| ||||| Sbjct 235100 CCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCA 235041 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || || || || ||||| ||||| ||||| ||||| || || ||||| Sbjct 235040 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234981 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| ||||| || ||| || ||| || | | | |||| | |||||| Sbjct 234980 ATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACA 234921 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || |||||||| || || |||||||| || || ||||| Sbjct 234920 TCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234874 >seq3 Length=3052702 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||| ||||| | ||||||||| | ||| |||||||||||| || || || Sbjct 340462 CCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCG 340403 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| || |||||||| || || | |||||||| || ||||| Sbjct 340402 AGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGA 340343 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| ||||| || ||| ||| || | | |||| | ||| || Sbjct 340342 ATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGACA 340283 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | || || || || || |||| |||||||||||| |||||||| Sbjct 340282 TCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||| ||||| ||| ||| || | || || ||||||||||| || || Sbjct 340199 CTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAA 340140 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| || || ||||| | |||||||||||| || | || |||| || Sbjct 340139 AATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAA-TCTTAGCTTTCACGT 340081 Query 45265 CGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 || | |||| | | ||| || |||| ||||| ||||| || |||| ||||| | Sbjct 340080 TATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTACCAGTCAATGTCTTGA 340021 Query 45324 CAAAGATTTGCAT 45336 |||| |||||||| Sbjct 340020 CAAATATTTGCAT 340008 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||| ||||| ||| || || | || || || || |||||||| || Sbjct 339971 CTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAA 339912 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || ||||| || ||||| | |||||| |||||| ||| || ||| || Sbjct 339911 GATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATCTTAGCCTTCACGTT 339852 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | | |||||| |||| ||||| || || || || |||||||| || Sbjct 339851 ATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAAC 339792 Query 45325 AAAGATTTGCATGTTGCCTCAA 45346 ||| || ||||| ||| || || Sbjct 339791 AAAAATCTGCATATTGTCTGAA 339770 >seq20 Length=1052065 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || ||| |||||||| |||||||||||| || || | || Sbjct 925171 AACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCT 925230 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| || || |||||||| ||||| ||||| || || || || | ||| |||||||| Sbjct 925231 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCCTTGTCT 925290 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||||| | | | | || | | ||| || || | ||||| ||| Sbjct 925291 TGGATCTTGGCTTTAACATTGTCGATGGTATCACTAGACTCGACATCAAGAGTAATAGTC 925350 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| ||||| || |||||| Sbjct 925351 TTACCCGTGAGGGTCTTAACAAAAATCTGCATG 925383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074814801680