Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq4 379 3e-100 >seq4 Length=2624409 Score = 379 bits (420), Expect = 3e-100 Identities = 1011/1533 (66%), Gaps = 43/1533 (3%) Strand=Plus/Plus Query 62290 TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATT 62349 ||||||||| || ||||| | || | |||||||| || || || | ||| | Sbjct 310807 TATTCTGAACAGAACCACCGCTGGCGATCAATCTATTCTTCATGTCGTCGTCCCACAGAC 310866 Query 62350 TTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATA 62409 ||||||| | || |||| || ||| | ||||| | ||||| ||||||||||| | Sbjct 310867 CCATCTCGGTGAGGTCTTTAAGAAGGTGCTGATTAACGATCTGGAACTCTCCAGACAACA 310926 Query 62410 CTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTT 62469 | | || ||||||||||| || || || || || | ||| || || || ||||| || | Sbjct 310927 CACGACGTGTGTAAATATTGCTCGTGTAAGGCTCAATCGATTCGTTGTTACCCAAGATCT 310986 Query 62470 GAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC 62529 | || || || || || |||||||| || |||| | |||||||| ||| |||| | Sbjct 310987 GCGCGGTAGACGCGGTGGGCATAGGAGCGACCAGAAGACTATTTCGAAGTCCGTGCTTAG 311046 Query 62530 TGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNN 62589 || || || |||||| |||| | | ||||||||| ||| Sbjct 311047 CCATATTTTCCTTTAGACCAGCCCAGTCGTATCTATCCGACGGGGTTACATCCCACATAT 311106 Query 62590 NATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCT 62649 ||||||||||| || ||||| || |||||| |||| || ||| || || || Sbjct 311107 CGTATTGTAGAATGCCCTTACTCGCTGGGGATCCTTCATAAGTGGAATAAGGACCAAGCT 311166 Query 62650 TCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCT 62709 |||| ||||| || |||| | | |||| || || || || |||||||| | || Sbjct 311167 TCTCCGCTAGCTTGATACTCTCAGACACTGCAGAATAGTAGATTGTCTCAAAGATTTGCT 311226 Query 62710 TATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCG 62769 | || || | ||||||| ||||| ||||||||| || | ||| || ||||||| Sbjct 311227 TGTTGAGCACACGTGCTTCAGGGCTGTCAAATGGAAAACGCATTTTAATGAATGCGTCCG 311286 Query 62770 CTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTG 62829 | || ||||| ||||| | ||||| |||| || | ||||||| || ||||| Sbjct 311287 CCAACCCTTGCACACCTAATCCGATGGGTCGGTGGCGAAGATTAGAGTACTCGGCTTCCT 311346 Query 62830 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGA 62886 || ||| || || |||| || || || || || | |||| || | | ||| Sbjct 311347 TAACAGGGTAGTAGTTAACGTCGATTATCTTGTTCAAGTTTCGAGTGGCGACACGGGTGA 311406 Query 62887 CCACATCCTTCAGTTTGAGAAAATCAAA-----------TCGC-CCATCTATT---ACAA 62931 || | || ||||| |||||||||| |||| ||| | || || Sbjct 311407 CCTCTTCG---AGTTTTTGAAAATCAAACTCGGGTCCATTCGCGCCACCGGTTTTCACGT 311463 Query 62932 ACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGC--ATCCGCATA 62989 |||| |||||| | || |||| ||||||||||| |||||| ||| | | | || Sbjct 311464 ACATCGGCAATGCGAGGGAGGCCAAGTTACACACGGCCACCTCAGTAGGGGAACTG--TA 311521 Query 62990 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACT 63049 | | ||||| ||| | ||||| |||||||| ||||| | || || || || Sbjct 311522 CTCGACAATCTCGCAGCACAAGTTACTGCACTTGATGGTTCCAAGGTTCTGCTGGTTGGA 311581 Query 63050 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 63109 || ||| || ||||| ||||| | || | || || || || || |||||||||| Sbjct 311582 TTTGCGGTTGCAAGCATCTTTATACAACATATAGGGGGTTCCGGTCTCGGTCTGAGATTC 311641 Query 63110 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC--CTTTCTCTT 63167 || ||| || ||| | | | || || || | || || ||| | |||| | Sbjct 311642 TAAAATTGCGAACCATAACTGTTGGGCTTTGAT--AACCTTCTTAGCTCGACCTTCTTTC 311699 Query 63168 TCGTA--TAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGAC 63225 ||||| || |||| |||| |||||||| |||||||| |||| ||| | || ||| Sbjct 311700 TCGTACTTATGATATA-AATC-CTCGAACTCCTCTCCCCACACATCGTCTAGTCCGGGAG 311757 Query 63226 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 63285 ||| || | | || ||||||||| | || ||| || |||||||| | || Sbjct 311758 CATCAGATGGTGAGAACAGCGACCACTCAGCATCGGCCTCGCATCTCTTCATAAACAAAT 311817 Query 63286 CAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCT 63345 | ||||| ||| | | || ||||||| || | |||||| |||||||||| Sbjct 311818 CGTTGATCCATAGACCGAAGAAAAGATCTCGTGCGCGCATCTCCTCGGACCCTGTATTCT 311877 Query 63346 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63405 | || | || | || | | |||||| | |||||| || |||||||| ||||| | Sbjct 311878 TCTTCAAGTCAATAAAGTCGAAAATATCGGCATGCCATGGCTCCAAGTACATGGCAAATG 311937 Query 63406 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63465 |||| || || |||||||| |||||||| | ||| | ||| ||||| || | |||| | Sbjct 311938 CTCCCGGGCGCTTGTTTCCACCCTGATCGACGTAACGAGCAGTGTTGTTGAACACTCGAA 311997 Query 63466 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCAC 63525 ||| || | | ||||| || | || || ||||| ||||| || | | |||||| Sbjct 311998 GCATGGGGACGAGTCCGTTCGAATTGCCGTTAGTACCCGAGATGTAACTATCCTTGGCAC 312057 Query 63526 GAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63583 |||| | | | |||| || || || || || || | || ||||| | || || Sbjct 312058 GAATCTTGTGCACATTG--AGTCCGATGCCACCAGCACTCTTGGAGATCATGGCACAGGT 312115 Query 63584 TTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643 || | || | || || ||||| || |||||||| || | |||| || || || Sbjct 312116 CTTGAGTGTATTGTATATACCTTCGATACTATCATCCTCAATAGTGAGTAAGAAGCAACT 312175 Query 63644 AGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63703 |||| || | ||| ||| || ||||| || | ||||| ||||| || || ||||| Sbjct 312176 CGACAACTGAGGGCGAAGAGTACCAGCATTGAACAGAGTAGGGGAAGCATGTGTGAACCA 312235 Query 63704 TTTTTCAGAAAG-TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAAT 63760 | || ||| || ||| ||||| ||||||||||| ||||| |||| ||| | |||||| Sbjct 312236 TCCTTGAGATAGATAG-TTGTATGTCTCAATAGCAGAGTCGATAT--CATCGCCATGAAT 312292 Query 63761 TCCTACTGCGACACGCATTAACATGTGCTGAGG 63793 || || |||||||| | |||||| ||||| Sbjct 312293 ACCCACACTTACACGCATAAGCATGTGTTGAGG 312325 Score = 271 bits (300), Expect = 1e-67 Identities = 412/584 (71%), Gaps = 3/584 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || |||||||||||||| ||||| ||||| | ||| || | ||||||||||| || ||| Sbjct 1029417 CAGGCGAAATCGCAGTGAAGACCTTCGTCCCGACTGATGAGCTCGTTAGAAAATGTTAGT 1029358 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| || |||||||| || | |||||| || ||||| || || || || |||||| Sbjct 1029357 CCAGGCATGAGACCACGCTTCTTCATCCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAG 1029298 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT-GT-- 33758 || || || || || |||||||||| || | || || || | |||| || Sbjct 1029297 ATACCCTCAACGGCGGCAAAGGCAACAATGCGTTCACCGAAAGTTGATTCCTCATCGTTA 1029238 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 |||||||| ||||||| |||||||| || |||||| ||| | || || || || || Sbjct 1029237 ATCCACTTAAGAGCCCAGTCGGCCTTTTTCTTTACAGCAGGAAGTGTCTCGATAGCGTTG 1029178 Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878 ||||| | | || | | ||| |||||| || || || | | | ||||||| Sbjct 1029177 AAGAGGTGATCCTTCTGAAACGGATCACGAACATATGTTTCAATGAGAGTAGAATACATT 1029118 Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938 || || ||||| ||||| || || ||||| || ||||||||||| | |||||||| ||| Sbjct 1029117 TCGGAGTGAATATTTTCGATAGCAATCTGGAAACCGTAGAAACAGCGAGCCTCGGGGATC 1029058 Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998 ||||| || | | || | || | |||||| || || || ||||||||||| ||| Sbjct 1029057 TGCACCTCACTGGAGAACCTGTCCAAAAGATTTTCGTTGACAATGCCATCACTGGCGGCA 1028998 Query 33999 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCA 34058 || ||||| | || || | |||| ||| ||| | | || || | ||| || Sbjct 1028997 AAGAACGCAAGAACGTGAGACAAGAAATGTTTCTCGCCGTCCTTAAGATTGTCCCAGTCG 1028938 Query 34059 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 34118 | ||| || | ||||||||| || || ||||| || || || ||||| || ||| Sbjct 1028937 GCCAGATCACGTGAGAGATCCACTTCCTCAACAGTCCAGAAGGACGCTTCTGCTTTCTTA 1028878 Query 34119 TACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 ||||| | |||||| || || || ||||| ||||| | ||| || Sbjct 1028877 TACATCTGCCAGATCTCTTGGTACTGGATAGGGAAGAGAACGAA 1028834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816970182400