Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4 196 5e-45 >seq4 Length=2624409 Score = 196 bits (216), Expect = 5e-45 Identities = 398/588 (68%), Gaps = 11/588 (2%) Strand=Plus/Minus Query 11630 CACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAAT 11689 || || ||||| || || | ||||||||| | ||| || || || ||||||||||||| | Sbjct 1029417 CAGGCGAAATCGCAGTGAAGACCTTCGTCCCGACTGATGAGCTCGTTAGAAAATGTTAGT 1029358 Query 11690 CCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAAT 11749 || ||||| | || || || || |||||||| |||| |||||| |||||||| ||||| Sbjct 1029357 CCAGGCATGAGACCACGCTTCTTCATCCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAG 1029298 Query 11750 ATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC------ATATACCTTGTTGCTA 11803 || ||||| || || ||||| || || | | ||| || || ||| | | || Sbjct 1029297 ATACCCTCAACGGCGGCAAAGGCAACAATGCGTTCACCGAAAGTTGATTCCTCATCGTTA 1029238 Query 11804 GATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTAC-GCATTCCATTGTTTCTATAGC 11862 ||||| || ||||| || || || || ||||| ||| | ||| || ||||| Sbjct 1029237 ---ATCCACTTAAGAGCCCAGTCGGCCTTTTTCTTTACAGCA-GGAAGTGTCTCGATAGC 1029182 Query 11863 GTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922 ||| || | || || | | ||| | |||||||| || || | | ||| Sbjct 1029181 GTTGAAGAGGTGATCCTTCTGAAACGGATCACGAACATATGTTTCAATGAGAGTAGAATA 1029122 Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGA 11982 |||||| || ||||||||||| ||||| || || || || |||||||| || ||||| | Sbjct 1029121 CATTTCGGAGTGAATATTTTCGATAGCAATCTGGAAACCGTAGAAACAGCGAGCCTCGGG 1029062 Query 11983 ACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGA 12042 ||| || || | || || ||| | ||| || || ||||| |||||||| | Sbjct 1029061 GATCTGCACCTCACTGGAGAACCTGTCCAAAAGATTTTCGTTGACAATGCCATCACTGGC 1029002 Query 12043 TGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCA 12102 ||||| || || || | || | || | ||| ||| | | | | || ||||| Sbjct 1029001 GGCAAAGAACGCAAGAACGTGAGACAAGAAATGTTTCTCGCCGTCCTTAAGATTGTCCCA 1028942 Query 12103 ATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTG 12162 || | | ||| ||| | ||| ||||| ||||| ||||| || || ||| || Sbjct 1028941 GTCGGCCAGATCACGTGAGAGATCCACTTCCTCAACAGTCCAGAAGGACGCTTCTGCTTT 1028882 Query 12163 TTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAA 12210 |||||||| | |||||| || || |||| |||||||| | |||||| Sbjct 1028881 CTTATACATCTGCCAGATCTCTTGGTACTGGATAGGGAAGAGAACGAA 1028834 Score = 109 bits (120), Expect = 5e-19 Identities = 283/430 (66%), Gaps = 6/430 (1%) Strand=Plus/Plus Query 37123 AGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTA 37182 ||||| |||| || | ||| || |||||||| || || | | ||| || |||||||| Sbjct 310890 AGGTGCTGATTAACGATCTGGAACTCTCCAGACAACACACGACGTGTGTAAATATTGCTC 310949 Query 37183 GTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATT 37242 || || || ||||| || || || |||| || || || | ||||| || || ||||| Sbjct 310950 GTGTAAGGCTCAATCGATTCGTTGTTACCCAAGATCTGCGCGGTAGACGCGGTGGGCATA 311009 Query 37243 GGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTC 37302 || || | ||||| ||||||| | ||| || || || | | ||||| || | Sbjct 311010 GGAGCGACCAGAAGACTATTTCGAAGTCCGTGCTTAGCCATATTTTCCTTTAGACCAGCC 311069 Query 37303 CAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTC 37362 || || || ||| | ||| | ||||||||| ||||||||||| || |||||| Sbjct 311070 CAGTCGTATCTATCCGACGGGGTTACATCCCACATATCGTATTGTAGAATGCCCTTACTC 311129 Query 37363 GCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACT---A 37419 ||||| || | | ||| || |||||| || | | ||||| | | ||| | Sbjct 311130 GCTGGGGATCCTTCATAAGTGGAATAAGGACCAAGCTTCTCCGCTAGCTTGATACTCTCA 311189 Query 37420 GATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCT 37479 || | ||| | ||| || ||||| || || ||||| | || | | |||||| Sbjct 311190 GA---CACTGCAGAATAGTAGATTGTCTCAAAGATTTGCTTGTTGAGCACACGTGCTTCA 311246 Query 37480 TCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATA 37539 ||| || |||| | | | || | || || | || ||||| || || ||||| | Sbjct 311247 GGGCTGTCAAATGGAAAACGCATTTTAATGAATGCGTCCGCCAACCCTTGCACACCTAAT 311306 Query 37540 CCTATGGGTC 37549 || ||||||| Sbjct 311307 CCGATGGGTC 311316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524331475200