Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 8e-16 >seq3 Length=3052702 Score = 98.7 bits (108), Expect = 8e-16 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||||||||||| | |||||| | || || | || || |||||||| Sbjct 339971 CTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAA 339912 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTC 43036 || | || |||||||| | || | ||| ||||| || |||| || | || || Sbjct 339911 GATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTC-CTGAATCTTAGCCTTCACGT 339853 Query 43037 TGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096 | ||| ||||| | || ||| || || | || |||||||||||||| ||||| || | Sbjct 339852 TATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAA 339793 Query 43097 CAAAAATTTGCAtttt 43112 ||||||| ||||| || Sbjct 339792 CAAAAATCTGCATATT 339777 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 ||||| || | ||| |||||| || | ||| ||||| | | || ||| | || ||| Sbjct 340444 ACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCGAGAGTGCGTCCATCCTCC 340385 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | || || ||||||||||| | ||||||||||| | || | || ||||| || | Sbjct 340384 AGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGAATGCCCTCTTTGTCTTGG 340325 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 ||| | || || | ||| ||||| | | |||||| |||| || || ||||| Sbjct 340324 ATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGACATCTAATGTGATTGTTTTA 340265 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAt 43109 ||||| | ||| |||||||| |||||||| Sbjct 340264 CCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369228164640