Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 327 2e-84 >seq4 Length=2624409 Score = 327 bits (362), Expect = 2e-84 Identities = 1172/1821 (64%), Gaps = 44/1821 (2%) Strand=Plus/Plus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| | ||||| ||||| || || || || | || | || ||||| || | | Sbjct 310627 TCCAGGCATAAAAGTGCATGCTTGTGAGCTTTCCAAAGTTGGGCTCGGCAATAAACACGT 310686 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 | | |||||| || ||| ||| | || || | || |||||||| | || | ||| Sbjct 310687 TGAACGACTGGCTCTGACAGATATAAGCGCCTCGATCAGCAGCCATGTCAATCAAACTCT 310746 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA 71046 | || | | ||||||| ||| ||||| || || || || || |||| |||| Sbjct 310747 TCTGCGAGACCTCCCAAACAGTGCGATAAATGTCTCTCAA-ATGCTCCGGAATACGTGTA 310805 Query 71047 ---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAAT 71103 ||||||| || ||||| || || | ||||| || || || || | ||| | Sbjct 310806 ATATTCTGAACAGAACCACCGCTGGCGATCAATCTATTCTTCATGTCGTCGTCCCACAGA 310865 Query 71104 TTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAAT 71163 ||||||| | || |||| || || ||||||| | || || ||||||||||| Sbjct 310866 CCCATCTCGGTGAGGTCTTTAAGAAGGTGCTGATTAACGATCTGGAACTCTCCAGACAAC 310925 Query 71164 ACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATT 71223 || | ||| ||||||||||| || || || || || | || || || || ||||| || Sbjct 310926 ACACGACGTGTGTAAATATTGCTCGTGTAAGGCTCAATCGATTCGTTGTTACCCAAGATC 310985 Query 71224 TGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATG-TGA 71282 || || || || || || |||||||| || |||| |||||||||| ||| || || | | Sbjct 310986 TGCGCGGTAGACGCGGTGGGCATAGGAGCGACCAGAAGACTATTTCGAAGTCCGTGCTTA 311045 Query 71283 TCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNN 71342 | || || || |||||| |||| | | |||||| || || Sbjct 311046 GCC-ATATTTTCCTTTAGACCAGCCCAGTCGTATCTATCCGACGGGGTTACATCCCACAT 311104 Query 71343 NNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTC 71402 ||||| ||||| || |||||| |||| || || || || Sbjct 311105 ATCGTATTGTAGAATGCCCTTACTCGCTGGGGATCCTTCATAAGTGGAATAAGGACCAAG 311164 Query 71403 TTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTT 71462 || || ||||| | |||| | | ||| ||| || || || || || || | Sbjct 311165 CTTCTCCGCTAGCTTGATACTCTCAGACACTGCAGAATAGTAGATTGTCTCAAAGATTTG 311224 Query 71463 CTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTC 71522 ||| ||||| | ||||||| ||||| ||||||||| || | ||| || ||||| Sbjct 311225 CTTGTTGAGCACACGTGCTTCAGGGCTGTCAAATGGAAAACGCATTTTAATGAATGCGTC 311284 Query 71523 TGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTC 71582 || || ||||| || || | ||||| |||| ||| | |||||| || ||||| Sbjct 311285 CGCCAACCCTTGCACACCTAATCCGATGGGTCGGTGGCGAAGATTAGAGTACTCGGCTTC 311344 Query 71583 TGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACTATTACTTT 71639 || ||| || || |||| || || || || || | |||| || | | | Sbjct 311345 CTTAACAGGGTAGTAGTTAACGTCGATTATCTTGTTCAAGTTTCGAGTGGCGACACGGGT 311404 Query 71640 GACCACATCCTTTAGTTTGAGAAAATCAAA-----------TCTC-CCATCTATT---AC 71684 |||| | || ||||| |||||||||| || | ||| | || || Sbjct 311405 GACCTCTTCG---AGTTTTTGAAAATCAAACTCGGGTCCATTCGCGCCACCGGTTTTCAC 311461 Query 71685 AAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC--ATCGGCA 71742 ||| ||| || | || |||| ||||| ||||| |||||| ||| | | | Sbjct 311462 GTACATCGGCAATGCGAGGGAGGCCAAGTTACACACGGCCACCTCAGTAGGGGAACTG-- 311519 Query 71743 TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 71802 || | | ||| || ||| | ||||| |||||||||||||| | || || || || Sbjct 311520 TACTCGACAATCTCGCAGCACAAGTTACTGCACTTGATGGTTCCAAGGTTCTGCTGGTTG 311579 Query 71803 CTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 71862 || ||| || ||||| ||||| | ||| | || || || || || |||||||| Sbjct 311580 GATTTGCGGTTGCAAGCATCTTTATACAACATATAGGGGGTTCCGGTCTCGGTCTGAGAT 311639 Query 71863 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTT 71922 |||| ||| || ||| | | | || || || | ||||| || |||| | Sbjct 311640 TCTAAAATTGCGAACCATAACTGTTGGGCTTTGATAACCTTCTTAGCTCGACCTTCTTTC 311699 Query 71923 TCGTA-TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACA 71981 ||||| || || |||||| |||||||| |||||||| ||| ||||| ||| ||| Sbjct 311700 TCGTACTTATG-ATATAAATCCTCGAACTCCTCTCCCCACACATCGTCTAGTCCGGGAGC 311758 Query 71982 TTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATC 72041 ||| || | | || |||||||| |||| | | || |||||||| | ||| Sbjct 311759 ATCAGATGGTGAGAACAGCGACCACTCAGCATCGGCCTCGCATCTCTTCATAAACAAATC 311818 Query 72042 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTT 72101 ||||| ||| | | || ||||||| | | ||||||| ||||||||||| Sbjct 311819 GTTGATCCATAGACCGAAGAAAAGATCTCGTGCGCGCATCTCCTCGGACCCTGTATTCTT 311878 Query 72102 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 72161 || | || | || | | |||||| | |||||| || |||||||| ||||| | | Sbjct 311879 CTTCAAGTCAATAAAGTCGAAAATATCGGCATGCCATGGCTCCAAGTACATGGCAAATGC 311938 Query 72162 TCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 72221 |||||| || |||||||| |||||||| | ||| | ||| ||||| || | |||| | Sbjct 311939 TCCCGGGCGCTTGTTTCCACCCTGATCGACGTAACGAGCAGTGTTGTTGAACACTCGAAG 311998 Query 72222 CATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 72281 ||| || | | || || || || || || || ||||| || || | ||||||| Sbjct 311999 CATGGGGACGAGTCCGTTCGAATTGCCGTTAGTACCCGAGATGTAACTATCCTTGGCACG 312058 Query 72282 AATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 72339 ||| | ||| |||| || || || || || || | || ||||| | || || Sbjct 312059 AATCTTGTGCACATTG--AGTCCGATGCCACCAGCACTCTTGGAGATCATGGCACAGGTC 312116 Query 72340 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 72399 || | |||| || || || || |||||||||||| || | |||| || || || Sbjct 312117 TTGAGTGTATTGTATATACCTTCGATACTATCATCCTCAATAGTGAGTAAGAAGCAACTC 312176 Query 72400 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 72459 |||| || | ||| ||| || ||||| || | ||||| ||||| || || |||||| Sbjct 312177 GACAACTGAGGGCGAAGAGTACCAGCATTGAACAGAGTAGGGGAAGCATGTGTGAACCAT 312236 Query 72460 TTTTCAGACAG-TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--ATGTATT 72516 || ||| || ||| ||||| ||||||||||| || || |||| ||| | ||| || Sbjct 312237 CCTTGAGATAGATAG-TTGTATGTCTCAATAGCAGAGTCGATAT--CATCGCCATGAATA 312293 Query 72517 CCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTC 72576 || || |||||||| | ||| || ||||| | || | | ||| ||| | Sbjct 312294 CCCACACTTACACGCATAAGCATGTGTTGAGGACGCTCCGCTACCTTTCCATTAAGGCGA 312353 Query 72577 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCG 72636 | ||||| || |||| || || || ||||| || | ||| ||||| || || Sbjct 312354 AGTAAGTATGAACGCTCCAGCGTCTTGAATCCAAAGTACTGGTAGTTGAAGTCCCGGTCA 312413 Query 72637 TAAATAATAACCGAATTGAGT 72657 |||| |||| | || |||||| Sbjct 312414 TAAACAATAGCAGAGTTGAGT 312434 Score = 262 bits (290), Expect = 5e-65 Identities = 412/585 (70%), Gaps = 5/585 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || |||||||||||||| ||||| || || | ||| || | ||||| ||||| || ||| Sbjct 1029417 CAGGCGAAATCGCAGTGAAGACCTTCGTCCCGACTGATGAGCTCGTTAGAAAATGTTAGT 1029358 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || |||||||| || | |||||| ||||| ||||| || ||||| |||||| Sbjct 1029357 CCAGGCATGAGACCACGCTTCTTCATCCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAG 1029298 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT-GT-- 42241 || || || || || |||||||||| || | || || || | |||| || Sbjct 1029297 ATACCCTCAACGGCGGCAAAGGCAACAATGCGTTCACCGAAAGTTGATTCCTCATCGTTA 1029238 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 |||||||| ||||||| |||||||| || |||||| ||| | || || || || || Sbjct 1029237 ATCCACTTAAGAGCCCAGTCGGCCTTTTTCTTTACAGCAGGAAGTGTCTCGATAGCGTTG 1029178 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361 ||||| | | || | | ||| ||||||||| || || | | | ||||||| Sbjct 1029177 AAGAGGTGATCCTTCTGAAACGGATCACGAACATATGTTTCAATGAGAGTAGAATACATT 1029118 Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421 || || ||||| ||||| || || ||||| || ||||||||||| | ||||||| | | Sbjct 1029117 TCGGAGTGAATATTTTCGATAGCAATCTGGAAACCGTAGAAACAGCGAGCCTCGGGGATC 1029058 Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481 || || || | | || | || | ||||||||| || || || |||||||| ||| Sbjct 1029057 TGCACCTCACTGGAGAACCTGTCCAAAAGATTTTCGTTGACAATGCCATCACTGGCGGCA 1028998 Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA-TTTATTCCAATC 42540 || ||||| | || || | |||| ||| ||| ||| |||| || | ||| || Sbjct 1028997 AAGAACGCAAGAACGTGAGACAAGAAATGTTTCTCG-CCGTCCTTAAGATTGTCCCAGTC 1028939 Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600 | ||| || | ||| ||||| || || ||||| || || |||||||| || || Sbjct 1028938 GGCCAGATCACGTGAGAGATCCACTTCCTCAACAGTCCAGAAGGACGCTTCTGCTTTCTT 1028879 Query 42601 ATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 |||||| | |||||| || || || || || ||||| | ||| || Sbjct 1028878 ATACATCTGCCAGATCTCTTGGTACTGGATAGGGAAGAGAACGAA 1028834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138528860800