Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4 208 2e-48 seq3 178 3e-39 seq5 154 3e-32 seq20 134 3e-26 seq2 86.0 1e-11 >seq4 Length=2624409 Score = 208 bits (230), Expect = 2e-48 Identities = 390/563 (69%), Gaps = 15/563 (3%) Strand=Plus/Plus Query 268730 GATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGAT 268789 || || ||| |||||| || | || | || || || |||||||| || ||||| ||| Sbjct 1028861 GAGATCTGGCAGATGTATAAGAAAGCAGAAGCGTCCTTCTGGACTGTTGAGGAAGTGGAT 1028920 Query 268790 CTGTCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATA-TC 268848 || || ||| | || ||| | ||| | || | || | || |||| | || Sbjct 1028921 CTCTCACGTGATCTGGCCGACTGGGACAATCTTAAGGACGGCGAGA-AACATTTCTTGTC 1028979 Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908 | | |||||||||| ||||| | |||||||| || || ||||||||||| | || | Sbjct 1028980 TCACGTTCTTGCGTTCTTTGCCGCCAGTGATGGCATTGTCAACGAAAATCTTTTGGACAG 1029039 Query 268909 GTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968 ||||| ||||| ||||| || || || | ||||| ||||| |||||||| ||||| Sbjct 1029040 GTTCTCCAGTGAGGTGCAGATCCCCGAGGCTCGCTGTTTCTACGGTTTCCAGATTGCTAT 1029099 Query 268969 AGAAAATATTCATTCAGAGATGTACAGTCTATTA--ATAGATACTTATATAGATGATAAC 269026 ||||||||||| || || ||||| |||| | || || || ||| | |||| Sbjct 1029100 CGAAAATATTCACTCCGAAATGTAT--TCTACTCTCATTGAAACATATGTTCGTGATCCG 1029157 Query 269027 AACGAAAAGAAAAGACTATTTTCTTCTAT-GAGA-ACTATGGACTG-TGTGAGaaaaaaa 269083 | ||| | || || |||| |||| ||| ||| ||| | ||||| Sbjct 1029158 TTTCAGAAGGATCACCTCTTCAACGCTATCGAGACACTTC---CTGCTGTAAAGAAAAAG 1029214 Query 269084 TCTGAATGGGCTCTGAAATGGATAAACGATAGCG---CGCCTTACGGAGAAAGGTTAGTT 269140 | || |||||||| || ||||| |||||| | | ||| ||| ||| | | ||| Sbjct 1029215 GCCGACTGGGCTCTTAAGTGGATTAACGATGAGGAATCAACTTTCGGTGAACGCATTGTT 1029274 Query 269141 GCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTG 269200 || |||||||| || || ||||| ||||| || || |||||||| ||||||||||| || Sbjct 1029275 GCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGTTCTTTTGCTTCTATCTTTTGGATG 1029334 Query 269201 AAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAA 269260 ||||| | || || ||||| ||| |||| || |||||||| | || || |||||||| Sbjct 1029335 AAGAAGCGTGGTCTCATGCCTGGACTAACATTTTCTAACGAGCTCATCAGTCGGGACGAA 1029394 Query 269261 GGTTTACACTGCGACTTCGCTTG 269283 ||| | |||||||| ||||| || Sbjct 1029395 GGTCTTCACTGCGATTTCGCCTG 1029417 >seq3 Length=3052702 Score = 178 bits (196), Expect = 3e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||||||| || || || || ||||||||||| || || | || |||| || || Sbjct 340220 AAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATC 340161 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||||||||||||||||||||||| || | ||| ||||||||||| || || || || || Sbjct 340160 CTCTAGTTGTTTTCCAGCAAAAATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTC 340101 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| ||||| || || || | || || |||| || || || | |||||| || Sbjct 340100 CTGAATCTTAGCTTTCACGTTATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGT 340041 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||||||| | ||| || |||||||| ||||| Sbjct 340040 CTTACCAGTCAATGTCTTGACAAATATTTGCAT 340008 Score = 158 bits (174), Expect = 3e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 104323 TTTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||| ||| ||| ||||||| || ||||| | ||||| || || || ||||||||||| Sbjct 340472 TTTCTTTGCTCCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATT 340413 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||| |||| ||||| | || || || || || ||||| |||||||| || | |||||| Sbjct 340412 ATAATCAGCGAGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTG 340353 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||||||||| || || ||||| || || |||||||| || || || || | || || || Sbjct 340352 ATCAGGAGGAATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACT 340293 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || |||| ||| || || ||||| || | || || |||||||| ||||| Sbjct 340292 GGACTCGACATCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||||||| || || || || ||||||||||| || || | ||||| | || || Sbjct 339992 AAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATC 339933 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || ||||| ||||| || || | |||||||| ||||| || || ||||| || Sbjct 339932 TTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTC 339873 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || || || || | || || |||| || || || || |||||||| Sbjct 339872 CTGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGT 339813 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 || || || || || || ||||| |||||||| |||| Sbjct 339812 TTTTCCGGTGAGAGTCTTAACAAAAATCTGCATATTGT 339775 >seq5 Length=2516746 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||||| || || ||||| ||||||||||| |||||||||| || || | || || Sbjct 234174 AAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATC 234115 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || |||||||| ||||| | | ||| ||||| ||||| || ||||| ||||| Sbjct 234114 CTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATC 234055 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||| || || || || || | ||| || || | || || || || || ||||| Sbjct 234054 TTGAATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACATCCAGGGTGATAGT 233995 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || ||||| || || ||||||||||| Sbjct 233994 CTTTCCGGTGAGTGTCTTCACGAATATCTGCAT 233962 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||||| || || ||||| ||||||||||| |||||||||| || || | || || Sbjct 234630 AAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATC 234571 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || |||||||| ||||| | | ||| ||||| ||||| || ||||| ||||| Sbjct 234570 CTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATC 234511 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||| || || || || || | ||| || || | || || || || || ||||| Sbjct 234510 TTGAATCTTAGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGT 234451 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || ||||| || || || ||||||||||| Sbjct 234450 CTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234418 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||||| || || ||||| ||||||||||| |||||||||| || || | || || Sbjct 235086 AAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATC 235027 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || |||||||| ||||| | | ||| ||||| ||||| || ||||| ||||| Sbjct 235026 CTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATC 234967 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||| || || || || || | ||| || || | || || || || || ||||| Sbjct 234966 TTGAATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGT 234907 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || ||||| || || || ||||||||||| Sbjct 234906 CTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234874 >seq20 Length=1052065 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| | ||||||| || ||||| || || || || Sbjct 925186 GTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCTTCCAGCTGCTTGCCG 925245 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| ||||| || || || ||||| || || || ||||| ||||| Sbjct 925246 GCGAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCCTTGTCTTGGATCTTGGCTTTA 925305 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| |||| || || || || |||||||||||||| || || || Sbjct 925306 ACATTGTCGATGGTATCACTAGACTCGACATCAAGAGTAATAGTCTTACCCGTGAGGGTC 925365 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 925366 TTAACAAAAATCTGCAT 925382 >seq2 Length=3757272 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| || |||||||| | ||||| | || |||||||| || |||||| Sbjct 390219 GTAGATTCCTTCTGGATGTTATAGTCGGCAAGAGTGCGGCCATCTTCTAGCTGCTTTCCA 390278 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTT 104462 |||||||| | ||||| ||||| || || || |||| || Sbjct 390279 GCAAAAATCAATCTCTGCTGATCCGGGGGGATACCTTTTT 390318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397219816640