Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq20 105 6e-18 seq5 95.1 1e-14 seq3 82.4 6e-11 >seq20 Length=1052065 Score = 105 bits (116), Expect = 6e-18 Identities = 154/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 ||||| || ||||| ||| ||||| || |||||||| || || | ||| | || Sbjct 925171 AACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCT 925230 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 ||||||||||| ||| || | || ||||||||||||||| || | || ||||||||| Sbjct 925231 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCCTTGTCT 925290 Query 48635 ATAATTTTCTGCTT---GATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 || || |||| || | || |||||||| ||||||| || | || || Sbjct 925291 TGGATCTT-GGCTTTAACATTGTCG--ATGGTATCACTAGACTCGACATCAAGAGTAATA 925347 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| ||||| || || |||||||||||||| Sbjct 925348 GTCTTACCCGTGAGGGTCTTAACAAAAATCTGCAT 925382 >seq5 Length=2516746 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || ||||| | | || || || || ||| |||||| ||||||||||| || || Sbjct 234873 ACCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGC 234814 Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 || || ||| | ||||| |||||||| || || |||| ||||||||||||||| | Sbjct 234813 -AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234755 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || |||||| || ||| || ||| | | || || || | |||||| Sbjct 234754 GTATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCA 234695 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || |||||||| || || ||||| |||||||| Sbjct 234694 CATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || ||||| | | ||||| || | || ||| || |||||||| || ||||| Sbjct 234189 ACCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGC 234130 Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 || || ||| | ||||| |||||||| || || |||| ||||||||||||||| | Sbjct 234129 -AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234071 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || |||||| || ||| || ||| | | ||||| || | |||||| Sbjct 234070 GAATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCA 234011 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || |||||||| || ||||| || |||||||| Sbjct 234010 CATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCACGAATATCTGCAT 233962 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || ||||| | | || || || || ||| |||||| |||||||| || || || Sbjct 234417 ACCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGC 234358 Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 || || ||| | ||||| |||||||| || || |||| ||||||||||||||| | Sbjct 234357 -AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234299 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || |||||| || || || ||| | | || || || | |||||| Sbjct 234298 GAATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCA 234239 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || |||||||| || || ||||| |||||||| Sbjct 234238 CATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || ||||| | | ||||| || | || ||| || |||||||| || ||||| Sbjct 234645 ACCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGC 234586 Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 || || ||| | ||||| |||||||| || || |||| ||||||||||||||| | Sbjct 234585 -AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234527 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || |||||| || ||| || ||| | | ||||| || | |||||| Sbjct 234526 GAATACCTTCCTTATCTTGAATCTTAGCCTTCACGTTGTCAATGGTGTCACTGGACTCCA 234467 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || || || ||||| || || ||||| || |||||||| Sbjct 234466 CATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234418 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 ||| || |||||||| || ||||| || || ||| | ||||| |||||||| || || Sbjct 235065 CTCTTTCTGAATGTTATAGTCAGC-AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGA 235007 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 |||| ||||||||||||||| || | || |||||| || ||| || ||| | Sbjct 235006 AAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTCACGT 234947 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | ||||| || | |||||| || | || || || || ||||| || || |||| Sbjct 234946 TGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCA 234887 Query 48714 CAAAAATCTGCAT 48726 | || |||||||| Sbjct 234886 CGAATATCTGCAT 234874 >seq3 Length=3052702 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || ||||| | | |||| ||| | || |||||| ||||| |||||||| || Sbjct 340007 ACCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGC 339948 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || | || || |||||||| ||| | | || | ||| || |||||| || Sbjct 339947 GAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGG 339888 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || || |||||| ||| || ||| | | || || || |||||||| Sbjct 339887 AATACCCTCTTTGTCCTGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCAC 339828 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 || | || || ||||| ||||||||||| || |||||||||||||| ||||| Sbjct 339827 ATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAACAAAAATCTGCATATTGTCT 339773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250789280080