Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6 203 5e-48 seq10 172 9e-39 >seq6 Length=2225437 Score = 203 bits (224), Expect = 5e-48 Identities = 208/269 (77%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| || |||| | | || |||||||||||||| || |||||||| || | Sbjct 2129782 CGCTAAGCGTCACCGTAAGAT-TTTGCGTGATAACATCCAAGGTATTACCAAGCCTGCAA 2129840 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 ||||||| |||||||||||||||| ||||||||| |||| || | |||| ||||||| Sbjct 2129841 TCCGTCGATTGGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGGTCTTATCTACGAAGAGA 2129900 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| ||||||| ||| | | || | ||| ||| | || || | Sbjct 2129901 CCCGAGGTGTGCTCAAGGTCTTCCTTGAGAACATCATACGTGACGCTGTTACTTACACTG 2129960 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || |||||||| ||| | |||||| |||| ||||| ||||||||||||| Sbjct 2129961 AGCACGCCAAGCGAAAGACTGTTACCGCTATGGATGTCGTATATGCCTTGAAACGTCAAG 2130020 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| |||| || || ||| ||||| Sbjct 2130021 GACGTACCCTTTACGGCTTCGGAGGTTAA 2130049 Score = 167 bits (184), Expect = 4e-37 Identities = 200/269 (74%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||||||||| |||| | | || |||||||| || || || || || ||||||| Sbjct 1679714 CGCTAAGCGTCATCGTAAGAT-TTTACGTGATAACATTCAGGGTATTACGAAACCAGCTA 1679772 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | |||||| |||| || |||||||| ||||||||| |||| || | | || || |||| Sbjct 1679773 TTCGTCGTTTGGCCCGCCGTGGTGGTGTCAAGCGTATCTCCGGTCTTATTTACGAGGAGA 1679832 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| | ||| |||||| ||||||| | | | |||||| ||| || | || || | Sbjct 1679833 CTCGAGGTGTATTGAAGGTCTTCCTTGAAAACATTATCCGTGACGCCGTAACTTACACTG 1679892 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | |||||||| |||||||||||||| | ||||| | || |||||| | || ||||| | Sbjct 1679893 AACACGCTAAGCGTAAGACTGTCACTGCTATGGACGTTGTATATGCACTCAAGCGTCAGG 1679952 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | || | | || || || ||| ||||| Sbjct 1679953 GACGAACTTTGTACGGATTCGGAGGTTAA 1679981 >seq10 Length=1578466 Score = 172 bits (190), Expect = 9e-39 Identities = 201/269 (75%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| || |||||| | || ||||| ||||| || ||||| ||||| |||| Sbjct 269756 CGCTAAGCGTCACCGTAAGATCT-TACGTGATAATATCCAGGGTATCACTAAGCCTGCTA 269698 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| || ||||||| |||||||| ||||||||| |||| || | |||| ||||||| Sbjct 269697 TCCGCCGATTGGCTCGACGTGGTGGTGTCAAGCGTATCTCGGGTCTCATCTACGAAGAGA 269638 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| ||||||| | | |||||| ||| ||| || || |||| Sbjct 269637 CCCGAGGTGTGCTCAAGGTCTTCCTTGAAAATATTATCCGTGACGCTGTCACGTACACCG 269578 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||| ||||| || ||||| || || | |||||| | ||||| ||| | || || |||| Sbjct 269577 AGCATGCTAAGCGCAAGACAGTAACAGCTATGGATGTAGTCTACGCACTAAAGCGCCAAG 269518 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | || | |||| || || ||| ||||| Sbjct 269517 GACGAACCCTTTACGGATTCGGAGGTTAA 269489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075126855440