Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq42 140 2e-28 seq3 122 6e-23 seq13 118 7e-22 seq48 113 3e-20 seq25 113 3e-20 seq20 95.1 8e-15 >seq42 Length=3433 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 993 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 934 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 933 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 899 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2240 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 2181 Query 20007 GGTAATATTTAGCCTTA 20023 || |||||||||| ||| Sbjct 2180 GGCAATATTTAGCTTTA 2164 >seq3 Length=3052702 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||| || | | ||||| || | ||| |||||| |||||||| ||||||| Sbjct 340462 CCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCG 340403 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | ||| | || || | || ||||||||||| || ||||| |||||||| | || Sbjct 340402 AGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGA 340343 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| |||||||| || ||| |||||| || | | ||| || | || || Sbjct 340342 ATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGACA 340283 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||| || |||||||| ||||| || ||||| ||||| ||||| Sbjct 340282 TCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | |||||| | || | ||| | ||| |||||| |||||||||||||| | Sbjct 340008 TACCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGG 339949 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | |||| | || || | || ||||||||||| || || ||||||||||| | | Sbjct 339948 CGAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAG 339889 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||||||| ||| || |||||| || | | || || | | || | Sbjct 339888 GAATACCCTCTTTGTCCTGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCA 339829 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | || | ||||||||||| || || | || || || || |||||||| || Sbjct 339828 CATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAACAAAAATCTGCATATT 339777 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | |||||| | || | ||| | ||| |||||| |||||||||||||| | Sbjct 340236 TACCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATC-G 340178 Query 38149 ACAAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| ||||| || |||| ||||||||| ||||| || || || || ||||| Sbjct 340177 GCAA---GTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAAAATAAGACGCTGCTGATCA 340121 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | || | ||| || |||||| ||| || ||||| || | | || || | | Sbjct 340120 GGAGGAATGCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTATCAATCGTGTCACTAGAC 340061 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || |||||||| || ||||| ||||| || || || ||||| ||||| Sbjct 340060 TCAACGTCCAATGTAATGGTCTTACCAGTCAATGTCTTGACAAATATTTGCAT 340008 >seq13 Length=1318117 Score = 118 bits (130), Expect = 7e-22 Identities = 82/93 (88%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| |||||||||||||||||||||||||| || ||||| || Sbjct 813887 AAGCCCGTTCCCTTGGTAGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTTGT 813946 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 |||||| |||||||||||||||||||| ||||| Sbjct 813947 TAATCCATTCATGCGCGTCACTAATTAAATGAC 813979 >seq48 Length=1330 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||| ||||||| |||||||| || |||||||| Sbjct 1178 AAGCCCGTTCCCTTGGCTGTGGTTTCGTTAGATAGGAGATAGGGACAGTGGGAATCTCGT 1119 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| || |||||||||||||||| |||||||| Sbjct 1118 AAATCTATTTATGCGCGTCACTAATTTGATGACGA 1084 >seq25 Length=460934 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||| ||||||| |||||||| || |||||||| Sbjct 3344 AAGCCCGTTCCCTTGGCTGTGGTTTCGTTAGATAGGAGATAGGGACAGTGGGAATCTCGT 3403 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| || |||||||||||||||| |||||||| Sbjct 3404 AAATCTATTTATGCGCGTCACTAATTTGATGACGA 3438 >seq20 Length=1052065 Score = 95.1 bits (104), Expect = 8e-15 Identities = 73/87 (84%), Gaps = 5/87 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| |||||| |||||||||||||| ||||||||| |||||| || |||||| | Sbjct 23514 AAGCCTGTTCCCATGGCTGTGGTTTCGATAGATAGTAAATAGGGATAGTGGGAATCTCAT 23455 Query 25957 TAATCCTTTCATGCGCGTCACTAATTA 25983 ||||| |||||||| ||||||||||| Sbjct 23454 TAATCTATTCATGCGTGTCACTAATTA 23428 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || |||||||||||| ||||| ||| ||||| || || ||||| || | | Sbjct 925156 CCACCACGCAGACGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTC-GGC 925214 Query 38151 AAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 || | ||||| || || | || || ||||| || || | || || ||||| | Sbjct 925215 AAGA---GTTCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGG 925271 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 ||| | ||||| ||||| || || || ||||| | || ||||| | | || Sbjct 925272 GGGAATACCTTCCTTGTCTTGGATCTTGGCTTTAACATTGTCGATGGTATCACTAGACTC 925331 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || | |||||||| |||||||| | ||| || || || ||||||||| Sbjct 925332 GACATCAAGAGTAATAGTCTTACCCGTGAGGGTCTTAACAAAAATCTGCATG 925383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946873426480