Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3 172 5e-38 seq5 86.0 5e-12 >seq3 Length=3052702 Score = 172 bits (190), Expect = 5e-38 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| |||||||||||||||||| | |||||| | || || ||||| | Sbjct 340236 ATGCAAATATTTGTGAAGACTTTGACCGGTAAAACAATCACATTAGATGTCGAGTCCAGT 340295 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | || ||||| ||| ||| |||||||| || ||||| ||||| || Sbjct 340296 GACACTATTGA-TAACGTGAAGGCAAAGATCCAAGACAAAGAGGGCATTCCTCCTGATCA 340354 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | ||||||||||| || || | || |||| |||||| | | ||||| || Sbjct 340355 ACAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGATGGACGCACTCTCGCTGATTATAA 340414 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 |||||| || || ||||| |||| || || || || ||||||| ||| Sbjct 340415 TATTCAGAAGGAGTCCACCTTACACTTGGTACTCAGATTAAGAGGTGGA 340463 Score = 138 bits (152), Expect = 1e-27 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| ||||| ||||| |||| ||| | || || ||||| | Sbjct 340008 ATGCAAATATTTGTCAAGACATTGACTGGTAAGACCATTACATTGGACGTTGAGTCTAGT 340067 Query 25059 GACACTATCGAGTCAC-TGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || | || |||| || || | ||| ||||| || || ||||| ||||| | Sbjct 340068 GACACGATTGA-TAACGTGAAAGCTAAGATTCAG-GACAAGGAGGGCATTCCTCCTGATC 340125 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| |||||||||| || |||||| |||| |||| || || | | |||||||| Sbjct 340126 AGCAGCGTCTTATTTTTGCTGGAAAACAACTAGAGGATGGCCGAACACTTGCCGATTACA 340185 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||| || || || || | ||| |||| || Sbjct 340186 ATATTCAGAAGGAGTCAACTTTGCATCTAGTTCT 340219 Score = 120 bits (132), Expect = 3e-22 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | ||||| ||| | || || | || |||||||| | Sbjct 339780 ATGCAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCTAGT 339839 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || | || ||||| | || | ||| |||||||| || ||||| || || | Sbjct 339840 GACACGATTGA-TAACGTGAAGGCTAAGATTCAG-GACAAAGAGGGTATTCCTCCGGATC 339897 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || |||| |||||||| || || | ||||||| || ||| | | |||||||| Sbjct 339898 AACAACGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATTACA 339957 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||| || || || || | ||| |||| || Sbjct 339958 ATATTCAGAAGGAGTCAACTTTGCATCTAGTTCT 339991 >seq5 Length=2516746 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | ||||| || | || || | || |||||||| | Sbjct 234190 ATGCAGATCTTTGTAAAGACACTCACCGGAAAGACAATTACCCTGGATGTGGAGTCCAGT 234249 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || ||||| || ||| || || ||||| ||||| || || || Sbjct 234250 GACACTATTGACAACGTGAAGGCTAAGATCCAAGATAAGGAAGGTATTCCTCCGGATCAG 234309 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || || || || | || |||| || || | | ||| || || Sbjct 234310 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCCGACTATAAC 234369 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || || || || || Sbjct 234370 ATTCAGAAGGAGTCCACTCTGCACTTGGTACT 234401 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | ||||| || | || || | || |||||||| | Sbjct 234646 ATGCAGATCTTTGTAAAGACACTCACCGGAAAGACAATTACCCTGGATGTGGAGTCCAGT 234705 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || |||| || || | ||| || || ||||| || || || || || Sbjct 234706 GACACTATTGACAACGTGAAGGCCAAGATTCA-AGATAAGGAAGGTATACCTCCGGATCA 234764 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||| || || || || | || |||| || || | | ||| ||||| Sbjct 234765 GCAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCCGACTACAA 234824 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || || || || || Sbjct 234825 CATTCAGAAGGAGTCCACTCTGCACTTGGTACT 234857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327577505200