Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 141 8e-29 seq20 140 3e-28 seq5 96.9 3e-15 >seq3 Length=3052702 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| ||||||||||| ||| | ||||| ||||| | ||||| || ||||| | Sbjct 339777 AATATGCAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCT 339836 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || | | || || ||||| ||||| ||||||||||| || ||| Sbjct 339837 AGTGACACGATTGATAACGTGAAGGCTAAGATTCAGGACAAAGAGGGTATTCCTCCGGAT 339896 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||||||||||| |||||||| || ||| | || ||| || || || |||||||| Sbjct 339897 CAACAACGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATTAC 339956 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || || || || | ||| ||||| | || ||||| || ||| Sbjct 339957 AATATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGGT 340007 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| ||||||||||| |||| | || || || ||| Sbjct 340236 ATGCAAATATTTGTGAAGACTTTGACCGGTAAAACAATCACATTAGATGTCGAGTCCAGT 340295 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||| || |||||||| ||||| ||||| || |||||| Sbjct 340296 GACACTATTGATAACGTGAAGGCAAAGATCCAAGACAAAGAGGGCATTCCTCCTGATCAA 340355 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || |||||||| || ||| | |||||| ||||| || | ||||| || Sbjct 340356 CAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGATGGACGCACTCTCGCTGATTATAAT 340415 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || |||||| |||| || || Sbjct 340416 ATTCAGAAGGAGTCCACCTTACACTTGGT 340444 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || ||||| || | || | || || || | | Sbjct 340008 ATGCAAATATTTGTCAAGACATTGACTGGTAAGACCATTACATTGGACGTTGAGTCTAGT 340067 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| || ||||| ||||||||||| ||||| || ||||| Sbjct 340068 GACACGATTGATAACGTGAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAG 340127 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || ||||| |||||||| ||| || | |||||||||| Sbjct 340128 CAGCGTCTTATTTTTGCTGGAAAACAACTAGAGGATGGCCGAACACTTGCCGATTACAAT 340187 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | ||| ||||| | || ||||| || ||| Sbjct 340188 ATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGGT 340235 >seq20 Length=1052065 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||||||||| || | || ||||| || | |||||||| || || | | Sbjct 925382 ATGCAGATTTTTGTTAAGACCCTCACGGGTAAGACTATTACTCTTGATGTCGAGTCTAGT 925323 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | ||| || || ||||||||||| |||||||| || ||||| Sbjct 925322 GATACCATCGACAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCGGATCAG 925263 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || |||||||| ||| | || ||| ||| || | |||| |||||| Sbjct 925262 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGAACTCTTGCCGACTACAAC 925203 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||||||| | || || || ||||| |||| || || Sbjct 925202 ATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGTCTGCGTGGTGG 925156 >seq5 Length=2516746 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || | || || || ||||| ||| Sbjct 234646 ATGCAGATCTTTGTAAAGACACTCACCGGAAAGACAATTACCCTGGATGTGGAGTCCAGT 234705 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || |||||||| ||||| ||||| || || ||||| Sbjct 234706 GACACTATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATACCTCCGGATCAG 234765 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || || ||| | |||||| || || | |||| |||||| Sbjct 234766 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCCGACTACAAC 234825 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||| | || || || |||| ||||| || ||| Sbjct 234826 ATTCAGAAGGAGTCCACTCTGCACTTGGTACTGCGTTTGCGAGGTGGT 234873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727590765200