Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 212 1e-49 >seq4 Length=2624409 Score = 212 bits (234), Expect = 1e-49 Identities = 415/605 (69%), Gaps = 15/605 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || ||||| |||||| ||| ||||| ||||| || || || ||||||| Sbjct 1028987 CTTGCGTTCTTTGCCGCCAGTGATGGCATTGTCAACGAAAATCTTTTGGACAGGTTCTCC 1029046 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 | ||||||||| | ||||| ||||| |||||||| |||||||| || || || || Sbjct 1029047 AGTGAGGTGCAGATCCCCGAGGCTCGCTGTTTCTACGGTTTCCAGATTGCTATCGAAAAT 1029106 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| || |||| | | || | | || || | | ||||| | || Sbjct 1029107 ATTCACTCCGAAATGTATTCTACTCTCATTGAAACATATGTTCGTGATCCGTTTCAGAAG 1029166 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCA-TCAAGAAGAAGGCGGACTGGGC 42661 | || ||||| || || ||||| | || ||| | ||||| ||||| |||||||| Sbjct 1029167 GATCACCTCTTCAACGCTATCGAGACACTTCC-TGCTGTAAAGAAAAAGGCCGACTGGGC 1029225 Query 42662 GCTCAACTGGAT---CGA-GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 || || ||||| ||| ||| || |||| ||||| || | | || |||||| Sbjct 1029226 TCTTAAGTGGATTAACGATGAG----GAATCAACTTTCGGTGAACGCATTGTTGCCTTTG 1029281 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG- 42776 ||||||| ||||| ||||||||||| || | || || || ||||| ||| | ||| || Sbjct 1029282 CCGCCGTTGAGGGTATCTTCTTCTCTGGTTCTTTTGCTTCTATCTTTTGGATGAAGAAGC 1029341 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 ||| || ||||| ||||| || || || ||||| |||||||| ||||||| || || Sbjct 1029342 GTGGTCTC-ATGCCTGGACTAACATTTTCTAACGAGCTCATCAGTCGGGACGAAGGTCTT 1029400 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAG 42896 || | || || |||||||| || | | || |||| | ||||||| || Sbjct 1029401 CACTGCGATTTCGCCTGCCTTTTGCAC---ACACATCTCAACCGCAAGCCCAGCCCCGAT 1029457 Query 42897 CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCG 42956 ||| | ||||||| ||| || ||| |||||| |||||||||||||| | | Sbjct 1029458 ATTGTCAAGAGAATCATCATGGACGCTGTGCGTATCGAGCAGGAGTTCCTCACGGATGCT 1029517 Query 42957 CTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTC 43016 || || ||| | || | || ||||||||| | ||||||||| ||||||| ||| ||| Sbjct 1029518 CTTCCTGTGGCGCTCATTGGAATGAACCACAAGCTCATGTGCCAGTACATTGAGTTCGTT 1029577 Query 43017 GCCGA 43021 ||||| Sbjct 1029578 GCCGA 1029582 Score = 123 bits (136), Expect = 5e-23 Identities = 549/857 (64%), Gaps = 27/857 (3%) Strand=Plus/Plus Query 244403 TAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGG 244462 |||||||| ||||| ||||| |||||| | | || || | || | || || Sbjct 311202 TAGTAGATTGTCTCAAAGATTTGCTTGTTGAGCACACGTGCTTCAGGGCTGTCAAATGGA 311261 Query 244463 ATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGT 244522 | | ||| | ||||| |||| |||| || ||||| || | |||||||||| ||| Sbjct 311262 AAACGCATTTTAATGAATGCGTCCGCCAACCCTTGCACACCTAATCCGATGGGTCGGTGG 311321 Query 244523 CGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTG 244582 || || ||| | |||||| || ||||| |||| ||||||| | |||||| Sbjct 311322 CGAAGATTAGAGTACTCGGCTTCCTTAACAGGGTAGTAGTTAACGTCGATTATCTTGTTC 311381 Query 244583 AGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGA 244642 | ||| || ||| | ||| ||| || | || ||||| || ||||| | Sbjct 311382 AAGTTTCGAGTGGCGACACGGGTGACCTCTTCGAGTTTTTGAAAATCAAACTCGGGTCCA 311441 Query 244643 TCCTCGGCGATGGTGATCCTCACAAAC-TCGTTGAGGGCGACGCTGGCCAGGTTGCAGAC 244701 | | || | ||| || || || ||| | | ||| | ||||| ||| || || Sbjct 311442 TTCGCGCCACCGGTTTTC---ACGTACATCGGCAATG-CGAGGGAGGCCAAGTTACACAC 311497 Query 244702 GGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGAT 244761 ||||||||| | | |||||| |||||||||| ||| | ||||||||||||||| Sbjct 311498 GGCCACCTCAGTAGGGGAACTGTACTCGACAATCTCGCAGCACAAGTTACTGCACTTGAT 311557 Query 244762 GGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGG 244821 ||| || |||| ||| || ||||| ||| |||||| || || || || | ||| |||| Sbjct 311558 GGTTCCAAGGTTCTGCTGGTTGGATTTGCGGTTGCAAGCATCTTTATACAACATATAGGG 311617 Query 244822 CCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTG---AC 244878 ||||||||| ||| | | | | | ||| | | || ||| || Sbjct 311618 GGTTCCGGTCTCGGTCTGAGATTCTAAAATTGCGAACCATAACTGTTGGGCTTTGATAAC 311677 Query 244879 CGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTG-TACAGGGCCTCGAACTCGGGGC 244937 | || | ||| || ||| |||||| | || || | |||||||||| | Sbjct 311678 CTTCTT---AGCTCGACCTTCTTTCTCGTA-CTTATGATATAAATCCTCGAACTCCTCTC 311733 Query 244938 CCCAGACCTCGTCTAGGCCGGG-GCA--CGACGCCGGGCACATGAGACTCCACTCGCCGC 244994 |||| || |||||||| ||||| ||| || | | | ||| | || |||||| | Sbjct 311734 CCCACACATCGTCTAGTCCGGGAGCATCAGATGGTGAGAACA-GCGA--CCACTCAGCAT 311790 Query 244995 CGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGG 245054 || ||| | |||| ||| || | ||| |||||| || | ||| || || | | Sbjct 311791 CGGCCTCGCATCTCTTCATAAACAAATCGTTGATCCATAGACCGAAGAAAAGATCTCGTG 311850 Query 245055 TCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGT 245114 | | ||| || || || || |||||| ||| || | |||||| || | ||| | | Sbjct 311851 CGCGCATCTCCTCGGACCCTGTATTCTTCTTCAAGTCAATAAAGTCGAAAATATCGGCAT 311910 Query 245115 GCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCA 245174 |||| ||||||| ||| | || | || || || |||||||| || ||||| || | Sbjct 311911 GCCATGGCTCCAAGTACATGGCAAATGCTCCCGGGCGCTTGTTTCCACCCTGATCGA--- 311967 Query 245175 TCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 | | ||||| |||||| | || || | || || | ||||| || | |||| Sbjct 311968 -CGTAACGAGCAGTGTTGTTGAACACTCGAAGCATGGGGACGAGTCCGTTCGAATTGCCG 312026 Query 245231 TTGGTGCCCTTGATGTA 245247 || || ||| |||||| Sbjct 312027 TTAGTACCCGAGATGTA 312043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338255660800