Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 132 1e-25 seq3 114 3e-20 >seq5 Length=2516746 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || |||||||| || ||||| || || || || | || ||||| ||||| Sbjct 234152 TCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAA 234093 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| |||||| ||| || || ||||| ||||| || || || || |||||||| Sbjct 234092 ATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTG 234033 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || || ||||| ||||| ||||| || ||||| ||| Sbjct 234032 TCAATGGTGTCACTGGACTCCACATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCACG 233973 Query 288463 AATATCTGCATTATG-TTATTCTAA 288486 ||||||||||| ||| | |||||| Sbjct 233972 AATATCTGCATGATGAATTTTCTAA 233948 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || |||||||| || ||||| || || || || | || ||||| ||||| Sbjct 234608 TCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAA 234549 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| |||||| ||| || || ||||| ||||| || || || || |||||||| Sbjct 234548 ATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACGTTG 234489 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || |||||||| ||||| ||||| || ||||| ||| Sbjct 234488 TCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACG 234429 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 234428 AATATCTGCAT 234418 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || |||||||| || ||||| || || || || | || ||||| ||||| Sbjct 235064 TCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAA 235005 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| |||||| ||| || || ||||| ||||| || || || || |||||||| Sbjct 235004 ATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTG 234945 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || |||||||| ||||| ||||| || ||||| ||| Sbjct 234944 TCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACG 234885 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 234884 AATATCTGCAT 234874 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || ||||||||||| ||||| || || || || | || ||||| ||||| Sbjct 234380 TCCTTCTGAATGTTATAGTCGGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAA 234321 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| |||||| ||| || || ||||| ||||| ||||| || || |||||||| Sbjct 234320 ATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTG 234261 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || || || || || || ||||| ||||| || ||||| || Sbjct 234260 TCAATAGTGTCACTGGACTCCACATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACA 234201 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 234200 AAGATCTGCAT 234190 >seq3 Length=3052702 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||| || ||||| || || || || || |||| ||||||||| || || Sbjct 340198 TCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAAA 340139 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| ||| | || || || || || ||||| || || ||||||||||| Sbjct 340138 ATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTA 340079 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || | || || ||||| || |||| |||||||| Sbjct 340078 TCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTACCAGTCAATGTCTTGACA 340019 Query 288463 AATATCTGCAT 288473 ||||| ||||| Sbjct 340018 AATATTTGCAT 340008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653190854240