Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 seq5 111 2e-19 seq20 109 5e-19 >seq3 Length=3052702 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||||||| | ||||| ||| | |||||||||| ||||| ||||| ||| Sbjct 340006 CCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCG 339947 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || ||||| || || |||| | |||| ||||| ||||| |||||||| Sbjct 339946 AGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGGA 339887 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| | || | || | | || | ||||| | |||||||| Sbjct 339886 ATACCCTCTTTGTCC-TGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCAC 339828 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || ||||| || |||||||||||||| Sbjct 339827 ATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAACAAAAATCTGCAT 339780 >seq5 Length=2516746 Score = 111 bits (122), Expect = 2e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||||||||| || || || | | |||||||| ||||||||||||||| Sbjct 234872 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCA 234813 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| || || || || | | || | |||||| || ||||||||| Sbjct 234812 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGT 234753 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| || || ||| | || | || | ||| || | ||||| | ||||||| Sbjct 234752 ATACCTTCCTTATC-TTGAATCTTGGCCTTCACGTTG-TCAATAGTGTCACTGGACTCCA 234695 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || || || || || || |||||||| |||||||| Sbjct 234694 CATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||||||||| || || || | | |||||||| |||||||| |||||| Sbjct 234416 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCA 234357 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| || || || || | | || | |||||| || |||||||| Sbjct 234356 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234297 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| || || | | || | ||||| | |||||||| Sbjct 234296 ATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACA 234237 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || || || |||||||| |||||||| Sbjct 234236 TCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 >seq20 Length=1052065 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | | || ||||| || |||||||||||| Sbjct 925156 CCACCACGCAGACGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCA 925215 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || || |||| |||| | |||||| || ||||| || Sbjct 925216 AGAGTTCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGA 925275 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| || ||| | |||| || | ||| || | ||||| || Sbjct 925276 ATACCTTCCTTGTCTTGGATCTTGGCTTTAACATTG-TCGATGGTATCACTAGACTCGAC 925334 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | || ||||| || || || || |||||||||||||||||| Sbjct 925335 ATCAAGAGTAATAGTCTTACCCGTGAGGGTCTTAACAAAAATCTGCATGGCT 925386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261903737600