Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 120 3e-22 seq20 116 4e-21 seq3 98.7 9e-16 >seq5 Length=2516746 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || |||| ||||| || | || ||||| || ||||| ||||| ||| | Sbjct 234872 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCA 234813 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || ||||| ||||||||| | ||||| ||||||||||| |||||| Sbjct 234812 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGT 234753 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || || || ||| | |||| || | ||||| | ||| || Sbjct 234752 ATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTG-TCAATAGTGTCACTGGACTCCAC 234694 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||| || || |||||||| |||||||| Sbjct 234693 ATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || |||| ||||| || | || ||||| || ||||| || || ||| | Sbjct 234416 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCA 234357 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || ||||| ||||||||| | ||||| ||||||||||| ||||| Sbjct 234356 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234297 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| || ||| | |||| || | ||||| | ||| || Sbjct 234296 ATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTG-TCAATAGTGTCACTGGACTCCAC 234238 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||| || || |||||||| |||||||| Sbjct 234237 ATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || || | || || || | ||||||||||| ||||| || || || | Sbjct 234188 CCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCA 234129 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || ||||| ||||||||| | ||||| ||||||||||| ||||| Sbjct 234128 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234069 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || || || ||| | |||| || | |||||| | ||| || Sbjct 234068 ATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTG-TCAATGGTGTCACTGGACTCCAC 234010 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || || ||||| || || || || || ||||||||| Sbjct 234009 ATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCACGAATATCTGCATG 233961 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || || || | || || || | ||||||||||| ||||| || || || | Sbjct 235101 TCCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGC 235042 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||| || ||| || ||||| ||||||||| | ||||| ||||||||||| ||||| Sbjct 235041 AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGG 234982 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||| || || || ||| | |||| || | |||||| | ||| | Sbjct 234981 AATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTG-TCAATGGTGTCACTGGACTCCA 234923 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || |||||||| || || || || || |||||||| Sbjct 234922 CATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234874 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || || | || || || | ||||||||||| ||||| || || || | Sbjct 234644 CCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCA 234585 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || ||||| ||||||||| | ||||| ||||||||||| ||||| Sbjct 234584 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234525 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || || || ||| | |||| || | |||||| | ||| || Sbjct 234524 ATACCTTCCTTATCTTGAATCTTAGCCTTCACGTTG-TCAATGGTGTCACTGGACTCCAC 234466 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||| || || || || || |||||||| Sbjct 234465 ATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234418 >seq20 Length=1052065 Score = 116 bits (128), Expect = 4e-21 Identities = 169/235 (72%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 126885 CTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGC 126944 ||||||| || | ||||||||||| || | || || || || || || ||||| ||| Sbjct 925154 CTCCACCACGCAGACGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGG 925213 Query 126945 CCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAG 127004 | | || || ||| || ||||| || || ||| ||||||| ||||||||||| || | Sbjct 925214 CAAGAGTTCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGG 925273 Query 127005 GTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTC 127062 | || || |||||||| ||| || |||| | ||| |||| ||| || || ||| Sbjct 925274 GAATACCTTCCTTGTCTTGGATCTT-GGCTTTAACATTG-TCGATGGTATCACTAGACTC 925331 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 ||| || | || | || || || || || || || |||||||||||||||||| Sbjct 925332 GACATCAAGAGTAATAGTCTTACCCGTGAGGGTCTTAACAAAAATCTGCATGGCT 925386 >seq3 Length=3052702 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||||||||||||| | | || || ||| || ||||| ||||| Sbjct 339976 GTTGACTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTCGAGCTGCTTTCCG 339917 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || || ||||| ||||| || ||||| |||||| || || ||| Sbjct 339916 GCAAAGATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATCTTAGCCTTC 339857 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| || ||| || || | || | ||||| ||||| ||||| Sbjct 339856 ACGTTATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTTTCCGGTGAGAGTC 339797 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 339796 TTAACAAAAATCTGCAT 339780 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||||||||||||| | | || || ||| ||||| ||||||||| Sbjct 340204 GTTGACTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCTAGTTGTTTTCCA 340145 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || | || | ||||||||||| ||||| ||||||||||||||| ||| | | || || Sbjct 340144 GCAAAAATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCC-TGAATCTTAGCTTT 340086 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | || | ||||| || ||| || || | || | || || || |||| || Sbjct 340085 CACGTTATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTACCAGTCAATGT 340026 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| || ||||| Sbjct 340025 CTTGACAAATATTTGCAT 340008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500324499200