Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq5 100 2e-16 seq3 87.8 1e-12 >seq5 Length=2516746 Score = 100 bits (110), Expect = 2e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||||||||||||||||||| |||| |||| || || || || ||||| ||||| Sbjct 234416 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGC- 234358 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 || || || |||| || | || || || | ||||| |||||||||||||||| | Sbjct 234357 -AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234299 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTC 39668 | | ||||| || || || || || | | ||| || ||| ||| | || Sbjct 234298 GAATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGAC--TC 234241 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||| |||| |||||||| || || || | || ||||| ||||||||||| Sbjct 234240 CACATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 100 bits (110), Expect = 2e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||||||||||||||||||| |||| |||| || || || || || || ||||| Sbjct 234872 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGC- 234814 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 || || || |||| || | || || || | ||||| |||||||||||||||| | Sbjct 234813 -AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234755 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTC 39668 ||| ||||| || || || || || | | ||| || ||| ||| | || Sbjct 234754 GTATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGAC--TC 234697 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||| |||| |||||||| || || || | || ||||| ||||||||||| Sbjct 234696 CACATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 >seq3 Length=3052702 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 |||||||| || || ||| || || || ||||||||||| || | | |||| |||| Sbjct 340447 AGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCGAGAGTGCGTCCATCC 340388 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 |||| || || ||| ||||||| | ||||| ||||| | || | ||| |||||||| Sbjct 340387 TCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGAATGCCCTCTTTGTCT 340328 Query 39628 CATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTG 39685 || ||| || | | || || ||| ||| | || || || || || |||| Sbjct 340327 TGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGAC--TCGACATCTAATGTGATTG 340270 Query 39686 TTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||||| || ||||| || || || || ||||| Sbjct 340269 TTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347369261314640