Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3 163 6e-35 seq5 141 2e-28 seq20 125 2e-23 >seq3 Length=3052702 Score = 163 bits (180), Expect = 6e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || | ||| ||||| || ||||||||||||||||| ||||| | |||||||| Sbjct 339989 AACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTC 339930 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || |||||||| |||||||| || |||||||| || |||||||| || Sbjct 339929 GAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCCTG 339870 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| ||||| ||||| | ||||| || || |||| || || Sbjct 339869 AATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTT 339810 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | ||| || || || | ||||| Sbjct 339809 TCCGGTGAGAGTCTTAACAAAAATCTGCAT 339780 Score = 132 bits (146), Expect = 1e-25 Identities = 150/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| || |||||||| ||||| || ||||| | ||||| || |||||||| || Sbjct 340432 GTGGACTCCTTCTGAATATTATAATCAGCGAGAGTGCGTCCATCCTCCAGCTGCTTTCCG 340373 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || || || || || ||||| || ||||||||||| ||||||||||| || ||| ||| Sbjct 340372 GCAAAAATGAGGCGCTGTTGATCAGGAGGAATGCCCTCTTTGTCTTGGATCTTTGCCTTC 340313 Query 195064 ACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAG 195121 ||||| ||||| |||| | | || || || || | || | || || || ||||||| Sbjct 340312 ACGTTATCAATAGTGTCACTGGAC--TCGACATCTAATGTGATTGTTTTACCGGTCAAAG 340255 Query 195122 TTTTTACGAACACTTGCAT 195140 | || || || | |||||| Sbjct 340254 TCTTCACAAATATTTGCAT 340236 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || | ||| ||||| || |||||||||||||||||||| |||| ||||| || Sbjct 340217 AACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTC 340158 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || || || || || || ||||| || || || || ||||||||||| || ||||| || Sbjct 340157 TAGTTGTTTTCCAGCAAAAATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTG 340098 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || || ||||| ||||| ||||| | || || || | |||| ||||| Sbjct 340097 AATCTTAGCTTTCACGTTATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTT 340038 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | |||||| Sbjct 340037 ACCAGTCAATGTCTTGACAAATATTTGCAT 340008 >seq5 Length=2516746 Score = 141 bits (156), Expect = 2e-28 Identities = 156/206 (76%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || ||||| ||||| |||||||| || | |||||| || ||||| Sbjct 234849 GTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGCGTACGCCCATCCTCAAGCTG 234790 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || | || || || || ||||| || ||||| || |||||||| || Sbjct 234789 CTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGTATACCTTCCTTATCTTGAATCTT 234730 Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| ||||| ||||| |||| | | || ||||| || ||||||| |||||||| Sbjct 234729 GGCCTTCACGTTGTCAATAGTGTCACTGGAC--TCCACATCCAGGGTAATTGTCTTTCCG 234672 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || ||||| || | ||||| Sbjct 234671 GTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 136 bits (150), Expect = 9e-27 Identities = 155/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||||||||| || ||||| || || |||||||| || | |||||| || ||||| Sbjct 234393 GTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCAAGCGTACGCCCATCCTCAAGCTG 234334 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || | || || || || |||||||| ||||| || ||||| || || Sbjct 234333 CTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGGATCTT 234274 Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| ||||| ||||| |||| | | || ||||| || ||||||| |||||||| Sbjct 234273 AGCCTTCACGTTGTCAATAGTGTCACTGGAC--TCCACATCCAGGGTAATTGTCTTTCCG 234216 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || ||||| || | ||||| Sbjct 234215 GTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 132 bits (146), Expect = 1e-25 Identities = 154/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | ||| |||||||| ||||| || || || ||||| || | |||||| || ||||| Sbjct 234165 GTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTG 234106 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || | || || || || |||||||| ||||| || |||||||| || Sbjct 234105 CTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTT 234046 Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| ||||| |||||||||| | | || ||||| || ||||| | |||||||| Sbjct 234045 GGCCTTCACGTTGTCAATGGTGTCACTGGAC--TCCACATCCAGGGTGATAGTCTTTCCG 233988 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 233987 GTGAGTGTCTTCACGAATATCTGCAT 233962 Score = 123 bits (136), Expect = 6e-23 Identities = 152/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | ||| |||||||| ||||| || || || ||||| || | |||||| || ||||| Sbjct 234621 GTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTG 234562 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || | || || || || |||||||| ||||| || |||||||| || Sbjct 234561 CTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTT 234502 Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| ||||| |||||||||| | | || ||||| || || || | ||||| || Sbjct 234501 AGCCTTCACGTTGTCAATGGTGTCACTGGAC--TCCACATCCAGCGTGATAGTCTTGCCG 234444 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 234443 GTAAGCGTCTTCACGAATATCTGCAT 234418 Score = 123 bits (136), Expect = 6e-23 Identities = 152/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | ||| |||||||| ||||| || || || ||||| || | |||||| || ||||| Sbjct 235077 GTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTG 235018 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || | || || || || |||||||| ||||| || |||||||| || Sbjct 235017 CTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTT 234958 Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| ||||| |||||||||| | | || ||||| || || || | ||||| || Sbjct 234957 GGCCTTCACGTTGTCAATGGTGTCACTGGAC--TCCACATCCAGCGTGATAGTCTTGCCG 234900 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 234899 GTAAGCGTCTTCACGAATATCTGCAT 234874 >seq20 Length=1052065 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | |||||| ||||| || || || || ||||| ||||||||||||| ||||| Sbjct 925170 CAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATC 925229 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| |||||||| || |||||||| | || || || || || ||||| ||||| ||||| Sbjct 925230 TTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCCTTGTC 925289 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || || || || || ||||| || | || || ||||| |||| || Sbjct 925290 TTGGATCTTGGCTTTAACATTGTCGATGGTATCACTAGACTCGACATCAAGAGTAATAGT 925349 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTA 195149 ||| || || | || || || || | ||||| |||||| Sbjct 925350 CTTACCCGTGAGGGTCTTAACAAAAATCTGCATGGCTGGTTA 925391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480462781360