Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 seq5 105 4e-18 >seq3 Length=3052702 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || || || | || | ||| |||| || ||||| ||||||||||| Sbjct 339970 TCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAAG 339911 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||| || || | || | ||||| ||||| |||||| || ||| Sbjct 339910 ATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATCTTAGCCTTCACGTTA 339851 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| |||| | ||| ||||| | || || |||||||| ||||||||||| ||| Sbjct 339850 TCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAACA 339791 Query 34971 AAGATCTGCATATT 34984 || ||||||||||| Sbjct 339790 AAAATCTGCATATT 339777 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||| || || || || | |||||||| | ||| || |||||||| ||||| || | Sbjct 340463 TCCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGC 340404 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 || | ||| |||| |||||||| ||||||||||| || || || || || || | || Sbjct 340403 GAGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGG 340344 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | ||||| ||||| ||||| || ||| | || | |||| || ||| || Sbjct 340343 AATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGAC 340284 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||| | || || ||||| || || | |||||||||||| || |||||| Sbjct 340283 ATCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCATA 340235 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || || || | ||| |||| |||| || || |||||||| ||||| Sbjct 340198 TCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAAA 340139 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||| ||| ||| Sbjct 340138 ATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTA 340079 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| |||| | |||||| || | || ||||| || || || | ||||| ||| Sbjct 340078 TCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTACCAGTCAATGTCTTGACA 340019 Query 34971 AAGATCTGCATA 34982 || || |||||| Sbjct 340018 AATATTTGCATA 340007 >seq5 Length=2516746 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | ||| | || |||||||| | ||| || ||||||||||||||||| | | Sbjct 234416 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCA 234357 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| ||||| || || || | || ||||| || | || Sbjct 234356 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234297 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || ||||| || ||||| || ||| | || | |||| || ||| ||| Sbjct 234296 ATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACA 234237 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | ||| || || ||||| ||||| ||||| ||||||||||||||| Sbjct 234236 TCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCATA 234189 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | ||| | || |||||||| | ||| || ||||||||||| ||||| | | Sbjct 234872 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCA 234813 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| ||||| || || || | || ||||| || | || Sbjct 234812 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGT 234753 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || ||||| || |||||| || ||| | || | |||| || ||| ||| Sbjct 234752 ATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACA 234693 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | ||| || || ||||| ||||| ||||| ||||||||||||||| Sbjct 234692 TCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCATA 234645 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||||||||| | ||| | || |||| || ||||| ||||| || || Sbjct 234152 TCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAA 234093 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || ||||| || | || | || ||||| || |||||| || ||| Sbjct 234092 ATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTG 234033 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || ||| ||||| | ||| || || ||||| ||||| |||||||| Sbjct 234032 TCAATGGTGTCACTGGACTCCACATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCACG 233973 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 233972 AATATCTGCAT 233962 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||||||||| | ||| | || |||| || ||||| ||||| || || Sbjct 234608 TCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAA 234549 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || ||||| || | || | || ||||| || |||||| || ||| Sbjct 234548 ATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACGTTG 234489 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || ||| ||||| | || || || || || || || |||||||| Sbjct 234488 TCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACG 234429 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 234428 AATATCTGCATA 234417 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||||||||| | ||| | || |||| || ||||| ||||| || || Sbjct 235064 TCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAA 235005 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || ||||| || | || | || ||||| || |||||| || ||| Sbjct 235004 ATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTG 234945 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || ||| ||||| | || || || || || || || |||||||| Sbjct 234944 TCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACG 234885 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 234884 AATATCTGCATA 234873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633283482240