Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4 226 3e-54 >seq4 Length=2624409 Score = 226 bits (250), Expect = 3e-54 Identities = 405/586 (69%), Gaps = 4/586 (1%) Strand=Plus/Minus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || || ||||| || || || || ||||| | ||| || | || ||||||||||||| Sbjct 1029417 CAGGCGAAATCGCAGTGAAGACCTTCGTCCCGACTGATGAGCTCGTTAGAAAATGTTAGT 1029358 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 |||||||| || || | || || | ||| || ||||||||||| || ||||| ||||| Sbjct 1029357 CCAGGCATGAGACCACGCTTCTTCATCCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAG 1029298 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 ||||| || || || ||||| ||||| | | ||| || || | | || | || | | Sbjct 1029297 ATACCCTCAACGGCGGCAAAGGCAACAATGCGTTCACCGAAAGTTGATTCCTCATCGTTA 1029238 Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200 ||||| || || ||||| || ||||| || |||||| || | |||||| |||| || Sbjct 1029237 ATCCACTTAAGAGCCCAGTCGGCCTTTTTCTTTACAGCAGGAAGTGTCTCGATAGCGTTG 1029178 Query 19201 AATAGATACATAC-GCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259 || || | || | || | | ||| |||||||| || || | | ||||| Sbjct 1029177 AAGAGGT-GATCCTTCTGAAACGGATCACGAACATATGTTTCAATGAGAGTAGAATACAT 1029119 Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319 ||| || ||||||||||| ||||| ||||| || ||||| ||||| | || || | || Sbjct 1029118 TTCGGAGTGAATATTTTCGATAGCAATCTGGAAACCGTAGAAACAGCGAGCCTCGGGGAT 1029059 Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 ||| || ||||| | || || || | | |||||| || || || |||||||| || || Sbjct 1029058 CTGCACCTCACTGGAGAACCTGTCCAAAAGATTTTCGTTGACAATGCCATCACTGGCGGC 1028999 Query 19380 AAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA-TGTATTCCAAT 19438 ||| || || | || || | |||||||| || | | |||| | | ||| | Sbjct 1028998 AAAGAACGCAAGAACGTGAGACAAGAAATGTTTCTC-GCCGTCCTTAAGATTGTCCCAGT 1028940 Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498 | | ||| || | ||| ||||| ||||| ||||| || || || |||||||| | Sbjct 1028939 CGGCCAGATCACGTGAGAGATCCACTTCCTCAACAGTCCAGAAGGACGCTTCTGCTTTCT 1028880 Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 ||||||| | ||| || || | || || ||||| || | ||| || Sbjct 1028879 TATACATCTGCCAGATCTCTTGGTACTGGATAGGGAAGAGAACGAA 1028834 Score = 131 bits (144), Expect = 2e-25 Identities = 480/744 (65%), Gaps = 12/744 (2%) Strand=Plus/Plus Query 47993 GTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGAT 48052 ||| || || || || || | |||| | || ||||| || || |||||||||| | || Sbjct 311588 GTTGCAAGCATCTTTATACAACATATAGGGGGTTCCGGTCTCGGTCTGAGATTCTAAAAT 311647 Query 48053 AGATTTCCA-AACAGTCCTAGCCTTT-ATAACAGCTCTAGCTTTATTATCATGTTCGTAT 48110 | ||| ||| || | | |||| ||||| ||||| | || | ||||| Sbjct 311648 TGCGAACCATAACTGT--TGGGCTTTGATAACCTTCTTAGCTCGACCTTCTTTCTCGTAC 311705 Query 48111 TTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTA 48170 ||| |||||| | ||| || || || || |||||| |||| || ||| ||| Sbjct 311706 TTATGATATAAATCCTCGAACTCCTCTCCCCACACATCGTCTAGTCCGGGAGCATCAGAT 311765 Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 || | | || ||||| || |||| | ||| ||||||| | ||| ||| Sbjct 311766 GGTGAGAACAGCGACCACTCAGCATCGGCCTCGCATCTCTTCATAAACAAATCGTTGATC 311825 Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290 || ||| | | || | ||| | | | | || || || ||||| | || | Sbjct 311826 CATAGACCGAAGAAAAGATCTCGTGCGCGCATCTCCTCGGACCCTGTATTCTTCTTCAAG 311885 Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350 |||| |||||| | ||||| ||||||||||| || || || || || | | | || || Sbjct 311886 TCAATAAAGTCGAAAATATCGGCATGCCATGGCTCCAAGTACATGGCAAATGCTCCCGGG 311945 Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410 || || || || || ||||| | || | ||||| ||||| | |||| | ||| ||| Sbjct 311946 CGCTTGTTTCCACCCTGATCGACGTAACGAGCAGTGTTGTTGAACACTCGAAGCATGGGG 312005 Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470 || | || || || | || || || ||||| || ||||| | | || | || || Sbjct 312006 ACGAGTCCGTTCGAATTGCCGTTAGTACCCGAGATGTAACTATCCTTGGCACGAATCTTG 312065 Query 48471 --CTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGG 48528 | ||||| || || ||||| || | || || || | ||||| || || | Sbjct 312066 TGCACATTGAGT--CCGATGCCACCAGCACTCTTGGAGATCATGGCACAGGTCTTGAGTG 312123 Query 48529 TATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTT 48588 ||| || || ||||| ||||||||||| ||| | | || || ||||| |||| | Sbjct 312124 TATTGTATATACCTTCGATACTATCATCCTCAATAGTGAGTAAGAAGCAACTCGACAACT 312183 Query 48589 GCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTG 48648 | || || ||| || | ||| || | || || || ||||| | |||||| | | Sbjct 312184 GAGGGCGAAGAGTACCAGCATTGAACAGAGTAGGGGAAGCATGTGTGAACCATCCTTGAG 312243 Query 48649 ATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTG--ATGTATACCTATAGA 48706 ||| | || ||||| |||||| |||| || |||| ||| | ||| ||||| | | Sbjct 312244 ATAGATAGTTGTATGTCTCAATAGCAGAGTCGATAT--CATCGCCATGAATACCCACACT 312301 Query 48707 TACACGCATTAACATATATTGAGG 48730 ||||||||| | ||| | |||||| Sbjct 312302 TACACGCATAAGCATGTGTTGAGG 312325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108237891200