Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 seq4 86.0 1e-11 >seq3 Length=3052702 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || | ||| || ||||| || | ||| || |||||||||||| | Sbjct 340462 CCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCG 340403 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || ||| | || |||| || || || |||||||| | | |||||| ||||| || Sbjct 340402 AGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGA 340343 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || || ||||| ||||| || || || || ||| ||||| || || || || Sbjct 340342 ATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGACA 340283 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| || || |||||||| || || || || | ||||| ||||| Sbjct 340282 TCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Score = 93.3 bits (102), Expect = 8e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 |||| ||| ||||| | ||| || |||||| ||||| | | | ||| | || || Sbjct 340216 ACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCT 340157 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 | |||||| ||||||||||| | | ||| || ||||| || || || || || || || Sbjct 340156 AGTTGTTTTCCAGCAAAAATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGA 340097 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 || ||| ||| || ||| || || || || || || || | |||||||| ||| Sbjct 340096 ATCTTAGCTTTCACGTTATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTA 340037 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| || | ||||| ||||| Sbjct 340036 CCAGTCAATGTCTTGACAAATATTTGCAT 340008 >seq4 Length=2624409 Score = 86.0 bits (94), Expect = 1e-11 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 39146 ACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTT 39205 ||||||||||| | || | || ||| ||| |||| ||| ||||| | || | ||| Sbjct 1029397 ACCTTCGTCCCGACTGATGAGCTCGTTAGAAAATGTTAGTCCAGGCATGAGACCACGCTT 1029338 Query 39206 TTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAA 39265 || | |||||| || || |||||| || ||| ||||| |||||||| || ||||| Sbjct 1029337 CTTCATCCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAGATACCCTCAACGGCGGCAAA 1029278 Query 39266 TGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCCAATTTATGGCCCAATC 39325 || | || | | | || || || ||| ||||| |||||| || | ||||| || Sbjct 1029277 GGCAACAATGCGTTCACCGAAAGTTGATTCCTCATCGTTAATCCACTTAAGAGCCCAGTC 1029218 Query 39326 TGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 39367 || ||||| || | || ||| | | || ||||| || || Sbjct 1029217 GGCCTTTTTCTTTACAGCAGGAAGTGTCTCGATAGCGTTGAA 1029176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135094864000