Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq20 136 3e-27 seq5 107 1e-18 seq3 107 1e-18 seq2 100 2e-16 >seq20 Length=1052065 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || ||||| |||||| ||||| |||||||| || || ||||| || || || Sbjct 925155 TCCACCACGCAGACGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGC 925214 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || || ||| || || || ||||| || | ||||| | ||||||||||| || Sbjct 925215 AAGAGTTCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGG 925274 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||| || |||||||| | || ||| ||| | || | || ||| | || || Sbjct 925275 AATACCTTCCTTGTCTTGGATCTTGGCTTTAACATTGTCGATGGTATCACTAGACTCGAC 925334 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| ||||| || || || | ||| |||||||| |||||||| Sbjct 925335 ATCAAGAGTAATAGTCTTACCCGTGAGGGTCTTAACAAAAATCTGCAT 925382 >seq5 Length=2516746 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||||||||| ||||| || || ||||| || || ||||||||||| || ||| Sbjct 234416 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCA 234357 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || || ||||| | ||||| | ||||||||||| ||| Sbjct 234356 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234297 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || || ||||| | || || || | || | ||||||| || || Sbjct 234296 ATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACA 234237 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || | || || ||||| |||||||| Sbjct 234236 TCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | |||||| || || || || | || || ||||| ||||||||||| || || Sbjct 235101 TCCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGC 235042 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || || ||| || || || || ||||| | ||||| | ||||||||||| || Sbjct 235041 AAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGG 234982 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 |||||| || || ||||| ||| || | || || | || | |||||| || | Sbjct 234981 AATACCTTCCTTATCTTG-AATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCA 234923 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || ||||| ||||| || | || || || ||||||||||| Sbjct 234922 CATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234874 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||| || || || || | || || ||||| ||||||||||| || ||| Sbjct 234644 CCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCA 234585 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || || ||||| | ||||| | ||||||||||| ||| Sbjct 234584 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234525 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || ||||| ||| || | || || | || | |||||| || || Sbjct 234524 ATACCTTCCTTATCTTG-AATCTTAGCCTTCACGTTGTCAATGGTGTCACTGGACTCCAC 234466 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || ||||| ||||| || | || || || ||||||||||| Sbjct 234465 ATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234418 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||||||||| ||||| || || ||||| || || |||||||| || || ||| Sbjct 234872 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCA 234813 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || || ||||| | ||||| | ||||||||||| || Sbjct 234812 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGT 234753 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || ||||| ||| || | || || | || | ||||||| || || Sbjct 234752 ATACCTTCCTTATCTTG-AATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCAC 234694 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || | || || ||||| |||||||| Sbjct 234693 ATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||| || || || || | || || ||||| ||||||||||| || ||| Sbjct 234188 CCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCA 234129 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || || ||||| | ||||| | ||||||||||| ||| Sbjct 234128 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234069 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || ||||| ||| || | || || | || | |||||| || || Sbjct 234068 ATACCTTCCTTATCTTG-AATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCAC 234010 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || ||||| || || || | || || || ||||||||||| Sbjct 234009 ATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCACGAATATCTGCAT 233962 >seq3 Length=3052702 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||| || || | ||| | || || || || ||||| || ||||| || Sbjct 340006 CCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCG 339947 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| ||||| || || || ||| | || | | ||| |||||||| ||| Sbjct 339946 AGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGGA 339887 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||||||||| || ||| || | || || | || | |||||| | || || Sbjct 339886 ATACCCTCTTTGTCCTG-AATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCAC 339828 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| |||||||| || || | || |||||||| |||||||| || Sbjct 339827 ATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAACAAAAATCTGCATATT 339777 Score = 93.3 bits (102), Expect = 3e-14 Identities = 164/238 (69%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 29550 TTATCGTTG-TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGT 29608 || || ||| ||| || || || | || ||||| || | ||||| || || ||||| | Sbjct 340473 TTTTCTTTGCTCCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATAT 340414 Query 29609 TATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCT 29668 ||||||| || | ||||| ||| || || || || || ||| | || | | || | Sbjct 340413 TATAATCAGCGAGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTT 340354 Query 29669 GATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAG 29728 |||| || ||||| |||||||||||||| | ||| || || | || | ||||||| Sbjct 340353 GATCAGGAGGAATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCAC 340294 Query 29729 AAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || || ||||| || || || || || |||||||| ||||| Sbjct 340293 TGGACTCGACATCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 >seq2 Length=3757272 Score = 100 bits (110), Expect = 2e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| |||||||| ||||| || ||||| || || |||||||| || ||| Sbjct 390189 CCACCACGCAGACGAAGCACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGGCA 390248 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || || |||||| | |||||||| ||||||||||| || Sbjct 390249 AGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAAATCAATCTCTGCTGATCCGGGGGG 390308 Query 29680 ATACC 29684 ||||| Sbjct 390309 ATACC 390313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218824411280