Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3 183 6e-41 seq5 165 2e-35 seq2 89.7 1e-12 >seq3 Length=3052702 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | |||||| ||||||| |||| ||| || || ||||| ||||| ||||| | Sbjct 340236 TACCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGG 340177 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || ||| || || |||||||||||||||||||| || || | || ||||| |||| Sbjct 340176 CAAGTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAAAATAAGACGCTGCTGATCAGGAG 340117 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || |||||||| ||||| || || |||||||| ||| ||| || | Sbjct 340116 GAATGCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTATCAATCGTGTCACTAGACTCAA 340057 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| || ||||| ||||| |||||||| ||||| Sbjct 340056 CGTCCAATGTAATGGTCTTACCAGTCAATGTCTTGACAAATATTTGCAT 340008 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| || | || || ||||| | || || || ||||| ||||||||||||| Sbjct 340462 CCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCG 340403 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || || || || || ||||| ||||| || || | |||||||| ||||| Sbjct 340402 AGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGA 340343 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || ||||| |||||||| || || || ||||| || ||| | | || || Sbjct 340342 ATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGACA 340283 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || || || || || ||||| ||||| |||||||| ||||| Sbjct 340282 TCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 >seq5 Length=2516746 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | |||||| || |||||||||| |||||| |||||||| || ||||| |||| Sbjct 234646 TACCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAG 234587 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || |||||||| || || | | || ||||| |||| Sbjct 234586 CAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234527 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||||||||| || || || || ||||| || ||| | | || | Sbjct 234526 GAATACCTTCCTTATCTTGAATCTTAGCCTTCACGTTGTCAATGGTGTCACTGGACTCCA 234467 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || |||||||| || | |||||| || ||||||||||| Sbjct 234466 CATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234418 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | |||||| || |||||||||| |||||| |||||||| || ||||| |||| Sbjct 235100 CCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAGCA 235041 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || || || || || |||||||| || || | | || ||||| ||||| Sbjct 235040 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234981 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||||||||||||||| || || || || ||||| || ||| | | || || Sbjct 234980 ATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCACA 234921 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| || | |||||| || ||||||||||| Sbjct 234920 TCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCACGAATATCTGCAT 234874 Score = 159 bits (176), Expect = 7e-34 Identities = 180/240 (75%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | |||||| || |||||||||| |||||| |||||||| || ||||| |||| Sbjct 234190 TACCACCACGCAAACGAAGTACTAAGTGCAAAGTAGACTCTTTCTGAATGTTATAGTCAG 234131 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || |||||||| || || | | || ||||| |||| Sbjct 234130 CAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234071 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||||||||| || || || || ||||| || ||| | | || | Sbjct 234070 GAATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATGGTGTCACTGGACTCCA 234011 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTT 82821 | |||| || || ||||| || || | ||||| || ||||||||||| || | ||||| Sbjct 234010 CATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCACGAATATCTGCATGATGA-ATTTT 233952 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| ||||||||| || ||||||||||| || || ||||| || || || || | Sbjct 234874 TACCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGG 234815 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || |||||||| || || | | || ||||| |||| Sbjct 234814 CAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234755 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 |||| |||||||||||||||||||| || || || || ||||| || ||| | | || | Sbjct 234754 GTATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCA 234695 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || ||||| || || | ||||||||||| |||||||| Sbjct 234694 CATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| ||||||||| || ||||||||||| || || ||||| || ||||| || | Sbjct 234418 TACCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGG 234359 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || |||||||| || || | | || ||||| |||| Sbjct 234358 CAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAG 234299 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||| ||||| || || || || ||||| || ||| | | || | Sbjct 234298 GAATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCA 234239 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || ||||| || || | ||||||||||| |||||||| Sbjct 234238 CATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 >seq2 Length=3757272 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || ||||| || |||||||| ||||| || ||||| || | Sbjct 390187 TACCACCACGCAGACGAAGCACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAGTCGG 390246 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | || |||||||| || ||||||||||| || | ||| || ||||| || | Sbjct 390247 CAAGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAAATCAATCTCTGCTGATCCGGGG 390306 Query 82702 GTATTCCTT 82710 | || |||| Sbjct 390307 GGATACCTT 390315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826193627120