Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5 105 6e-18 seq3 93.3 4e-14 seq4 89.7 5e-13 >seq5 Length=2516746 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || || || || | | ||| | ||||| |||||||| || Sbjct 234158 GTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCA 234099 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | |||||||| || ||||| || |||||||| || ||||| ||| Sbjct 234098 GCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTC 234039 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| ||| |||||| || | ||||| || || ||||| || || Sbjct 234038 ACGTTGTCAATGGTGTCACTGGACTCCACATCCAGGGTGATAGTCTTTCCGGTGAGTGTC 233979 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 233978 TTCACGAATATCTGCATG 233961 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || || || || | | ||| | ||||| |||||||| || Sbjct 234614 GTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCA 234555 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | |||||||| || ||||| || |||||||| || ||||| ||| Sbjct 234554 GCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTAGCCTTC 234495 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| ||| |||||| || | |||| || |||||||| || || Sbjct 234494 ACGTTGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTC 234435 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 234434 TTCACGAATATCTGCAT 234418 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || || || || | | ||| | ||||| |||||||| || Sbjct 235070 GTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCA 235011 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | |||||||| || ||||| || |||||||| || ||||| ||| Sbjct 235010 GCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTC 234951 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| ||| |||||| || | |||| || |||||||| || || Sbjct 234950 ACGTTGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTC 234891 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 234890 TTCACGAATATCTGCAT 234874 >seq3 Length=3052702 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | || | | | || ||||||||||| || Sbjct 339976 GTTGACTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCA-TCTTCGAGCTGCTTTCC 339918 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || || || || || ||||| || || || ||||| ||||| ||| Sbjct 339917 GGCAAAGATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATCTTAGCCTT 339858 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| |||||| | | |||||| || | || | ||||| ||||| ||||| Sbjct 339857 CACGTTATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTTTCCGGTGAGAGT 339798 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 339797 CTTAACAAAAATCTGCAT 339780 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA-TCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | | | | | | ||||| || || || || Sbjct 340204 GTTGACTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCA-TCCTCTAGTTGTTTTCC 340146 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || |||||||| || ||||| ||||| |||||||| ||||| || Sbjct 340145 AGCAAAAATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCTTT 340086 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| |||||| | | ||| ||||| | || | ||| || || |||| || Sbjct 340085 CACGTTATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTACCAGTCAATGT 340026 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 340025 CTTGACAAATATTTGCAT 340008 >seq4 Length=2624409 Score = 89.7 bits (98), Expect = 5e-13 Identities = 171/252 (68%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 148232 CTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCG 148291 |||| | ||||| | | || | |||||| || | ||| ||||| || | | ||| || Sbjct 310871 CTCGGTGAGGTCTTTAAGAAGGTGCTGATTAACGATCTGGAACTCTCCAGACAACACACG 310930 Query 148292 CCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGC 148351 || || | |||||||| | || |||| ||| |||||||| ||||| |||||||| Sbjct 310931 ACGTGTGTAAATATTGCTCGTGTAAGGCTCAATCGATTCGTTGTTACCCAAGATCTGCGC 310990 Query 148352 GGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT 148411 ||| | || |||||||| || ||||| || || || | ||| | || || Sbjct 310991 GGTAGACGCGGTGGGCATAGGAGCGACCAGAAGACTATTTCGAAGTCCGTGCTTAGCCAT 311050 Query 148412 TTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTA 148471 || ||| ||| | |||||||| | |||||| || || | |||||| ||||| Sbjct 311051 ATTTTCCTTTAGACCAGCCCAGTCGTATCTATCCGACGGGGTTACATCCCACATATCGTA 311110 Query 148472 CTGCAGAATGCC 148483 || |||||||| Sbjct 311111 TTGTAGAATGCC 311122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420316579200