Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 122 2e-22 seq20 95.1 3e-14 seq5 86.0 1e-11 >seq3 Length=3052702 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| |||||||| || ||| |||| ||||| | |||| Sbjct 339783 CAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCTAGTGAC 339842 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || ||||| || ||| ||||| ||| Sbjct 339843 ACGATTGATAACGTGAAGGCTAAGATTCAGGACAAAGAGGGTATTCCTCCGGATCAACAA 339902 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| |||||||||||| | ||||||||| | ||| | ||||||||||| | Sbjct 339903 CGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATTACAATATT 339962 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| ||| | || || ||| Sbjct 339963 CAGAAGGAGTCAACTTTGCATCTAGTT 339989 Score = 89.7 bits (98), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| || || | ||| ||||| ||||| | ||| || || || | ||| | ||||||||| Sbjct 339989 AACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTC 339930 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||||| |||||||| ||||||||| Sbjct 339929 GAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGA 339896 >seq20 Length=1052065 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| || || || || ||| | || || || | ||| Sbjct 925379 CAGATTTTTGTTAAGACCCTCACGGGTAAGACTATTACTCTTGATGTCGAGTCTAGTGAT 925320 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| || ||| ||||| || ||||| ||| ||||| || Sbjct 925319 ACCATCGACAATGTTAAAGCCAA-GATCCAAGACAAGGAAGGTATTCCCCCGGATCAGCA 925261 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | ||||||||||| |||||| |||||||||| | ||| | ||||| |||||| | Sbjct 925260 GCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGAACTCTTGCCGACTACAACAT 925201 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| || || || |||||| | || ||| | || || Sbjct 925200 CCAGAAGGAATCCACCCTTCACTTGGTGTTGCGTCTGCG 925162 >seq5 Length=2516746 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTC--TG 206230 |||||||| || || ||||| ||||| || ||||| |||| ||||| || | || Sbjct 233965 CAGATATTCGTGAAGACACTCACCGGAAAGACTATCACCCTGGATGTGGA--GTCCAGTG 234022 Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 |||| | || || ||| ||||||||||| || ||||| ||| ||||| | Sbjct 234023 ACACCATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATTCCTCCGGATCAGC 234082 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | | | || ||||| ||||||||| | || ||||| | || | || || || ||| Sbjct 234083 AGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTATAACA 234142 Query 206351 TCCAGAAAGAGTCTACTCTTCAC 206373 | ||||||||||||||| | ||| Sbjct 234143 TTCAGAAAGAGTCTACTTTGCAC 234165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819588633680