Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq5 93.3 4e-14 seq20 84.2 2e-11 >seq3 Length=3052702 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| || | ||| | ||| | ||||||| || ||||| ||||| ||| | || Sbjct 340001 ACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCGAGAGT 339942 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||||||||| || |||| | |||| ||||| |||||||| ||||| || || Sbjct 339941 ACGTCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGGAATACC 339882 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||||| || ||| || |||| | || | || || | | |||||| || | Sbjct 339881 CTCTTTGTCCTGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCACATCCAG 339822 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| || || ||||| || | ||||||||||| Sbjct 339821 AGTAATAGTTTTTCCGGTGAGAGTCTTAACAAAAATCTGCAT 339780 >seq5 Length=2516746 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| |||| ||||| || | | ||||| || ||||||||||||||| | ||| Sbjct 234866 CGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGCGTA 234807 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 ||| ||| || ||||| || || | | || | |||||| ||||| |||||||| ||| Sbjct 234806 CGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGTATACCT 234747 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || ||||| ||| || |||| | || | ||| || | | |||||| || | Sbjct 234746 TCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACATCCAGG 234687 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || || || || |||| || |||||||| Sbjct 234686 GTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 >seq20 Length=1052065 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||||| ||||| || | | | || || || || |||||||||||| | || Sbjct 925161 ACGCAGACGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGT 925220 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| ||||| || |||| |||| | |||||| ||||| || || || || Sbjct 925221 TCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGAATACC 925280 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || || || ||| | | || | ||||| | | ||| || || | Sbjct 925281 TTCCTTGTCTTGGATCTTGGCTTTAACATTGTCGATGGTATCACTAGACTCGACATCAAG 925340 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATTAGAT 132135 || | || ||||| || || || || | |||||||||||| || |||||| Sbjct 925341 AGTAATAGTCTTACCCGTGAGGGTCTTAACAAAAATCTGCATGGCTGGTTAGAT 925394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610723388800