Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 seq4 111 1e-19 >seq3 Length=3052702 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||| ||||| || || || || |||||||| || || | |||| | || || Sbjct 340445 TACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCGAGAGTGCGTCCATCCTC 340386 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| || ||||| ||||||| ||||||||||| || || | |||||||| || Sbjct 340385 CAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGAATGCCCTCTTTGTCTTG 340326 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| |||| | | || | |||||| ||| || || |||| || || | ||| Sbjct 340325 GATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGACATCTAATGTGATTGTTTT 340266 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| |||||||| ||||||||| Sbjct 340265 ACCGGTCAAAGTCTTCACAAATATTTGCATA 340235 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || | || | ||| || || || || || ||||||||||| ||| Sbjct 340006 CCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCG 339947 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||||||||| || ||||| | || ||||| ||||||||||| || Sbjct 339946 AGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGGA 339887 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||| || ||||| |||| | | || | ||||| | | || || Sbjct 339886 ATACCCTCTTTGTCCTGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCACA 339827 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| |||| ||| || || ||||| || ||||| || |||||| Sbjct 339826 TCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAACAAAAATCTGCATA 339779 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || | || | ||| || || || || || ||||||||||| ||| | Sbjct 340234 CCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCG-GC 340176 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || | || | || || || ||||| || || |||| |||||||| ||||| || || Sbjct 340175 AAGTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAAAATAAGACGCTGCTGATCAGGAGG 340116 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||| ||||| | | || | ||||| | | ||||| Sbjct 340115 AATGCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTATCAATCGTGTCACTAGACTCAAC 340056 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | || || |||| || || ||||| ||||||||| Sbjct 340055 GTCCAATGTAATGGTCTTACCAGTCAATGTCTTGACAAATATTTGCATA 340007 >seq4 Length=2624409 Score = 111 bits (122), Expect = 1e-19 Identities = 260/392 (66%), Gaps = 3/392 (1%) Strand=Plus/Plus Query 131650 TCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTC 131709 || ||||||||||||||| | ||||| || | || ||||||| || |||| Sbjct 311801 TCTCTTCATAAACAAATCGTTGATCCATAGACCGAAGAAAAGATCTCGTGCGCGCATCTC 311860 Query 131710 TTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTC 131769 || | || || | || ||||| | | |||||| ||||| || |||||||| || || Sbjct 311861 CTCGGACCCTGTATTCTTCTTCAAGTCAATAAAGTCGAAAATATCGGCATGCCATGGCTC 311920 Query 131770 CAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCAT 131826 ||| |||| || | ||| || |||| || || || |||| || | |||| | | Sbjct 311921 CAAGTACATGGCAAATGCTCCCGGGCGCTTGTTTCCACCCTGATCGACGTAACGAGCAGT 311980 Query 131827 GTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAAT 131886 ||||||| | || || | |||||| | | ||||| | || || || || | | || Sbjct 311981 GTTGTTGAACACTCGAAGCATGGGGACGAGTCCGTTCGAATTGCCGTTAGTACCCGAGAT 312040 Query 131887 GTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGA 131946 ||| || | ||||| | || ||||| || |||||||| || || || | || || Sbjct 312041 GTAACTATCCTTGGCACGAATCTTGTGCACATTGAGTCCGATGCCACCAGCACTCTTGGA 312100 Query 131947 GATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTC 132006 ||| | || || | | || || || || |||||||| | || || | |||| Sbjct 312101 GATCATGGCACAGGTCTTGAGTGTATTGTATATACCTTCGATACTATCATCCTCAATAGT 312160 Query 132007 GACTAAAAAGCAAGAGGACAACTGTTGGTGAA 132038 || ||| |||||| |||||||| || ||| Sbjct 312161 GAGTAAGAAGCAACTCGACAACTGAGGGCGAA 312192 Score = 93.3 bits (102), Expect = 4e-14 Identities = 165/240 (69%), Gaps = 3/240 (1%) Strand=Plus/Plus Query 130753 ATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812 ||||| ||| || || || |||| || || || | |||||| ||||||||| | || Sbjct 310898 ATTAACGATCTGGAACTCTCCAGACAACACACGACGTGTGTAAATATTGCTCGTGTAAGG 310957 Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872 |||| ||||||||||| || || || || || |||| ||||||||||| || || Sbjct 310958 CTCAATCGATTCGTTGTTACCCAAGATCTGCGCGGTAGACGCGGTGGGCATAGGAGCGAC 311017 Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932 | ||| ||| ||||| |||||| | | || ||| ||| | || |||| || | Sbjct 311018 CAGAAGACTATTTCGAAGTCCGTGCTTAGCCATATTTTCCTTTAGACCAGCCCAGTCGTA 311077 Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGG 130992 | | | || | ||| | ||||||||| ||||||| ||||| ||||| || || Sbjct 311078 TCTATCCGACGGGGTTACA---TCCCACATATCGTATTGTAGAATGCCCTTACTCGCTGG 311134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933985688960