Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 149 7e-31 >seq4 Length=2624409 Score = 149 bits (164), Expect = 7e-31 Identities = 257/368 (70%), Gaps = 4/368 (1%) Strand=Plus/Minus Query 53288 CCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCG 53347 || || |||||||| |||||||| || ||||||| ||||||| |||||| | | | Sbjct 312217 CCTACTCTGTTCAATGCTGGTACTCTTCGCCCTCAGTTGTCGAGTTGCTTCTTACTCACT 312158 Query 53348 ATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCC 53407 || ||||||| ||||| || || ||| | || |||||| |||||| |||||| Sbjct 312157 ATTGAGGATGATAGTATCGAAGGTATATACAATACACTCAAGACCTGTGCCATGATCTCC 312098 Query 53408 AAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAAT 53466 ||| | | ||||| ||||| || | ||| | || | ||||| || | | || Sbjct 312097 AAGAGTGCTGGTGGCATCGGACTCAATGTGCAC-AAGATTCGTGCCAAGGATAGTTACAT 312039 Query 53467 CAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACAC 53526 | ||| || |||||| | | ||| |||| || ||||| || || ||||||||||| Sbjct 312038 CTCGGGTACTAACGGCAATTCGAACGGACTCGTCCCCATGCTTCGAGTGTTCAACAACAC 311979 Query 53527 GGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGA 53586 || || |||||| | |||||||| |||||| ||| | || ||||| ||| | || Sbjct 311978 TGCTCGTTACGTCGATCAGGGTGGAAACAAGCGCCCGGGAGCATTTGCCATGTACTTGGA 311919 Query 53587 GCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAAT-CAGGGTGACGAAG 53645 ||| ||||| ||||| ||| | || ||| | || || |||| |||||| ||| | Sbjct 311918 GCCATGGCATGCCGATATTTTCGACTTTATTGACTTGAAGAAGAATACAGGGT-CCGAGG 311860 Query 53646 AGATGCGC 53653 |||||||| Sbjct 311859 AGATGCGC 311852 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 9/228 (4%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||| || | || || | || || ||||| | || |||||||| || ||||||||| Sbjct 1029396 CCTTCGTCCCGACTGATGAGCTCGTTAGAAAATGTTAGTCCAGGCATGAGACCACGCTTC 1029337 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||| ||||||||| | | || |||||| ||||||||| || || || |||||| Sbjct 1029336 TTCATCCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAGATACCCTCAACGGCGGCAAAG 1029277 Query 74889 GCGACAAGGCGTTGCGCGAACGGTG------CATCGGAAGTCATCCAAGTCTGAGCCCAT 74942 || |||| ||||| |||| | || ||||| | ||||| | ||||||| Sbjct 1029276 GCAACAATGCGTTCACCGAAAGTTGATTCCTCATCG---TTAATCCACTTAAGAGCCCAG 1029220 Query 74943 TCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGG 74990 || || ||| || || ||||| | || ||||| || | ||||||| Sbjct 1029219 TCGGCCTTTTTCTTTACAGCAGGAAGTGTCTCGATAGCGTTGAAGAGG 1029172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215452784000