Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 179 4e-40 seq5 176 5e-39 seq20 172 6e-38 seq4 143 3e-29 seq2 82.4 9e-11 >seq3 Length=3052702 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| | || || ||||| ||||| | || |||||||| || Sbjct 340008 ATGCAAATATTTGTCAAGACATTGACTGGTAAGACCATTACATTGGACGTTGAGTCTAGT 340067 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || |||| ||||| ||||||||||||||||| |||||||| || ||| Sbjct 340068 GACACGATTGATAACGTGAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAG 340127 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||||||||| || ||||| ||||||| || || || || || || ||| Sbjct 340128 CAGCGTCTTATTTTTGCTGGAAAACAACTAGAGGATGGCCGAACACTTGCCGATTACAAT 340187 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||| | |||||||| | ||| | || || || Sbjct 340188 ATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGG 340234 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || ||||| || ||||||||||| || || ||||| || Sbjct 339780 ATGCAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCTAGT 339839 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || |||||||||| ||||||||||| ||||| |||||||| || || Sbjct 339840 GACACGATTGATAACGTGAAGGCTAAGATTCAGGACAAAGAGGGTATTCCTCCGGATCAA 339899 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||| || ||||| ||||| |||| ||||| || || || || ||| Sbjct 339900 CAACGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATTACAAT 339959 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||| | |||||||| | ||| | || || || Sbjct 339960 ATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGG 340006 >seq5 Length=2516746 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||||||||||||||||||||| || || || || ||||| || Sbjct 234418 ATGCAGATATTCGTGAAGACGCTTACCGGCAAGACTATCACGCTGGATGTGGAGTCCAGT 234477 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || |||||||||| ||||| || ||||| || |||||||| || ||| Sbjct 234478 GACACCATTGACAACGTGAAGGCTAAGATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 234537 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| ||||| ||||| || ||||||| ||||| || || |||||||| Sbjct 234538 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTATAAC 234597 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || || ||| | || |||| | ||| | || ||||| Sbjct 234598 ATTCAGAAAGAGTCTACTTTGCACTTAGTACTTCGTTTGCGTGGTGG 234644 Score = 172 bits (190), Expect = 6e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||||||||||||||||||||| || || || || ||||| || Sbjct 234874 ATGCAGATATTCGTGAAGACGCTTACCGGCAAGACTATCACGCTGGATGTGGAGTCCAGT 234933 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || ||||||| || ||||| || ||||| || |||||||| || ||| Sbjct 234934 GACACCATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 234993 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | ||||| ||||| ||||| || ||||||| ||||| || || |||||||| Sbjct 234994 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTATAAC 235053 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || || || || ||| | || |||| | ||| | || |||||| Sbjct 235054 ATTCAGAAAGAGTCTACTTTGCACTTAGTACTTCGTTTGCGTGGTGGA 235101 >seq20 Length=1052065 Score = 172 bits (190), Expect = 6e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || || || ||||||||||||||||| || ||||| || Sbjct 925382 ATGCAGATTTTTGTTAAGACCCTCACGGGTAAGACTATTACTCTTGATGTCGAGTCTAGT 925323 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | || || || || || |||||||| || ||||| || || ||| Sbjct 925322 GATACCATCGACAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCGGATCAG 925263 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || || || ||||| || || |||| || || || || ||||| || Sbjct 925262 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGAACTCTTGCCGACTACAAC 925203 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||||||||| ||||| | || |||||||| || |||||| Sbjct 925202 ATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGTCTGCGTGGTGGA 925155 >seq4 Length=2624409 Score = 143 bits (158), Expect = 3e-29 Identities = 1086/1718 (63%), Gaps = 62/1718 (4%) Strand=Plus/Plus Query 80068 CCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATG 80127 || ||||||||| | || | |||||| ||||||| ||| |||| | | || Sbjct 310620 CCTTTCTTCCAGGCATAAAAGTGCATGCTTGTGAGCTTTCCAAAGTTGGGCTCGGCAATA 310679 Query 80128 AAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATA 80187 || | ||| | ||||| ||||||||| |||| || ||||| || ||||| ||||| Sbjct 310680 AACACGTTGAACGACTGGCTCTGACAGATATAAGCGCCTCGATCAGCAGCCATGTCAATC 310739 Query 80188 ATTGACTTTTGTGGAATTTCCCATACTGTACGATACACCTTACGAAGCTCCTCTGGAAT- 80246 | ||| || | | ||||| || || ||||| | | | | | ||| ||||| Sbjct 310740 AAACTCTTCTGCGAGACCTCCCAAACAGTGCGATAAATGTCTCTCAAATGCTCCGGAATA 310799 Query 80247 -GTCCAG-ATTTTGCACACTGCCACCGTCCTTTA-CAATTTGATTTTTCAATTCAGACGT 80303 || | ||| || ||| |||||| | |||| | ||| |||| || | ||| Sbjct 310800 CGTGTAATATTCTGAACAGAACCACCGCTGGCGATCAATCT-ATTCTTCATGTC-GTCGT 310857 Query 80304 CC-AGACACCAAGCTTGTGCAGATCTTTCACAAGGTGCTTGTTAATCATGACAAACTCTC 80362 || | | ||| | || | || ||||| | |||||||| |||| || ||||||| Sbjct 310858 CCCACAGACCCATCTCGGTGAGGTCTTTAAGAAGGTGCTGATTAACGATCTGGAACTCTC 310917 Query 80363 CCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTC 80422 | | | ||||| || | || | ||||||||||||| | |||||||| | Sbjct 310918 CAGACAACACACGACGTGTGTAAATATTGCTCGTGTAAGGCTCAATCGATTCGTTGTTAC 310977 Query 80423 CGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGC 80482 | | |||||| || || ||| || ||||| || |||||| || ||| || || | Sbjct 310978 CCAAGATCTGCGCGGTAGACGCGGTGGGCATAGGAGCGACCAGAAGACTATTTCGAAGTC 311037 Query 80483 CGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAA--ATCAACCCCAACGCTGTGAC- 80539 ||||||| |||| || | | | | ||| ||| | || | || || || Sbjct 311038 CGTGCTTAGCCATATTTTCCTTTAGACCAGCCCAGTCGTATCTATCCGA-CGGGGTTACA 311096 Query 80540 -CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||||| |||| || | ||||||| ||| || || || | | || || Sbjct 311097 TCCCACATATCGTATTGTAGAATGCCCTTACTCGCTGGGGATCCTTCATAAGTGGAATAA 311156 Query 80599 GGGCCCTCCGTCTTGGCCAGCTC-ACACGACTCCATAAGGGCCGCGTGATAAATGCACTC 80657 || || | ||| || |||| | || ||| | || | | || || ||| Sbjct 311157 GGACCAAGCTTCTCCGCTAGCTTGATACT-CTCAGACACTGCAGAATAGTAGATTGTCTC 311215 Query 80658 AAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717 ||||| |||||| | | || || | ||| ||| || | || | ||| | || Sbjct 311216 AAAGATTTGCTTGTTGAGCACACGTGCTTCAGGGCTGTCAAATGGAAAACGCATTTTAAT 311275 Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777 ||| |||| |||| || || || || | |||| || |||||||| || || Sbjct 311276 GAATGCGTCCGCCAACCCTTGCACACCTAATCCGATGGGTCGGTGGCGAAGATTAGAGTA 311335 Query 80778 CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAAC 80837 |||||| ||| || ||||| ||||| ||||| | ||||| ||| || || | Sbjct 311336 CTCGGCTTCCTTAACAGGGTAGTAGTTAACGTCGATTATCTTGTTCAAGTTTCGAGTGGC 311395 Query 80838 AACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATT-GGTTCC----------CC--- 80883 || || || || || | ||||| ||||| || || | || ||| || Sbjct 311396 GACACGGGTGACCTCTTCGAGTTTTTGAAAATCAAACTCGGGTCCATTCGCGCCACCGGT 311455 Query 80884 -TTCACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGC-- 80939 ||||| | ||| || || ||||| |||| || |||||||||||||| || Sbjct 311456 TTTCACGTACATCGGCAATGCG-AGGGAGGCCAAGTTACACACGGCCACCTCAGTAGGGG 311514 Query 80940 ATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTT 80999 | ||||| |||||| || || |||||| ||| |||| || || || ||||| | Sbjct 311515 AACTGTA--CTCGACAATCTCGCAGCACAAGTTACTGCACTTGATGGTTCCAAGGTTCTG 311572 Query 81000 CTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGAC 81059 |||||| || ||| ||||||||| || || || |||| || ||||| ||||||||| Sbjct 311573 CTGGTTGGATTTGCGGTTGCAAGCATCTTTATACAACATATAGGGGGTTCCGGTCTCGGT 311632 Query 81060 CTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTG-C 81118 ||| || | | || ||| ||| | || | || |||| ||||| | | | | | Sbjct 311633 CTGAGATTCTAAAATTGCGAACCATAACTGTTGGGCTTTGATAACCTT-CTTAGCTCGAC 311691 Query 81119 CTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGT 81178 |||| | | ||||| || || ||||||| | || | || || || Sbjct 311692 CTTCTTTCTCGTACTTATGATATAAATCCTCGAACTCCTCTCCCCACACATC-GTCTAGT 311750 Query 81179 CTGGGCAC-TCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGC-CTTCAT 81236 | ||| | || || | | ||| ||| || | ||| ||| || | |||||| Sbjct 311751 CCGGGAGCATCAGATGGTGAGAACAGCGACCACTCAGCATCGGCCTCG-CATCTCTTCAT 311809 Query 81237 GAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACC 81296 || || |||||| || || ||| || || || |||| |||||| ||| Sbjct 311810 AAACAAATCGTTGATCCATAGACCGAAGAAAAGATCTCGTGCGCGCATCTCCTCGG-ACC 311868 Query 81297 CTGGTTGAGGCG-CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACA 81355 ||| | | ||| || | |||||| | || || |||||||||||||||| |||| Sbjct 311869 CTGTATTCTTCTTCAAGTCAATAAAGTCGAAAATATCGGCATGCCATGGCTCCAAGTACA 311928 Query 81356 CGGCGATCGACCCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412 ||| | | ||| ||| | |||||||| | ||||||||| ||||| ||| | Sbjct 311929 TGGCAAATGCTCCCGGGCGCTTGTTTCCACCCTGATCGACGTAACGAGCAGTGTTGTTGA 311988 Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACC 81472 | || || | ||| |||| || || | || | ||||| |||||| ||| | || Sbjct 311989 ACACTCGAAGCATGGGGACGAGTCCGTTCGAATTGCCGTTAGTACCCGAGAT--GTAACT 312046 Query 81473 --CCTTGGCGCGCACCTTG--CTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATC 81528 ||||||| || | |||| | ||||| | ||||||||||| | | ||| || ||| Sbjct 312047 ATCCTTGGCACGAATCTTGTGCACATTGA--GTCCGATGCCACCAGCACTCTTGGAGATC 312104 Query 81529 TGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGC 81588 ||||| || | || | || || || ||||| ||||| | | || || Sbjct 312105 ATGGCACAGGTCTTGAGTGTATTGTATATACCTTCGATACTATCATCCTCAATAGTGAGT 312164 Query 81589 AAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCG 81648 ||||| || || |||| |||||||| | || ||||||||||| || |||| || Sbjct 312165 AAGAAGCAACTCGACAACTGAGGGCGAAGAGTACCAGCATTGAACAGAGTAGGGGAAGCA 312224 Query 81649 TGAATGAAATAACGGTTTGACATCAG---GTCATAGGTTTC-CTTGACGCGTGGAATATC 81704 || |||| | | |||| || || || || || || | | | || | ||||| Sbjct 312225 TGTGTGAACCATC--CTTGAGAT-AGATAGTTGTATGTCTCAATAGCAGAGTCG-ATATC 312280 Query 81705 GTCACCGTGAATACCGATAGCTACACGCATAAACATGT 81742 || || |||||||| | | ||||||||||| ||||| Sbjct 312281 ATCGCCATGAATACCCACACTTACACGCATAAGCATGT 312318 >seq2 Length=3757272 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || || || |||||| | | ||||||||||| ||||| || || |||| || Sbjct 390313 GGTATCCCCCCGGATCAGCAGAGATTGATTTTTGCTGGAAAGCAGCTAGAAGATGGCCGC 390254 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || || |||||||| |||| |||||||| || ||||| | || | ||||| || Sbjct 390253 ACTCTTGCCGACTATAACATCCAGAAGGAATCTACCCTTCACTTGGTGCTTCGTCTGCGT 390194 Query 27628 GGTGG 27632 ||||| Sbjct 390193 GGTGG 390189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309829689600