Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq5 120 2e-22 seq20 105 4e-18 seq3 105 4e-18 >seq5 Length=2516746 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| | ||||| ||||| || |||||| |||||| ||||||||||| || | | Sbjct 234416 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCA 234357 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| | || ||||| || || || || || || |||||||| || ||||| || Sbjct 234356 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234297 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| ||| |||| || | || ||| | ||| ||||| | |||||| Sbjct 234296 ATACCTTCCTTATCTTGGATC-TTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCAC 234238 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || ||||| | || || ||||| |||||||| Sbjct 234237 ATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 98.7 bits (108), Expect = 6e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||| || ||||||||||| || | ||| || ||| | || ||||| || || || || || Sbjct 234153 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 234094 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || |||||||| || ||||| || | || ||||| ||| ||| || | || ||| Sbjct 234093 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCT-TGAATCTTGGCCTTCACGT 234035 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| ||||| | |||||| |||| ||| || || || ||||| | || |||| Sbjct 234034 TGTCAATGGTGTCACTGGACTCCACATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCA 233975 Query 34694 CAAAAATCTGCATGTTGA 34711 | || ||||||||| ||| Sbjct 233974 CGAATATCTGCATGATGA 233957 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||| || ||||||||||| || | ||| || ||| | || ||||| || || || || || Sbjct 234609 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 234550 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || |||||||| || ||||| || | || ||||| ||| ||| || | || ||| Sbjct 234549 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCT-TGAATCTTAGCCTTCACGT 234491 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| ||||| | |||||| |||| || || || || ||||| | ||| |||| Sbjct 234490 TGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCA 234431 Query 34694 CAAAAATCTGCAT 34706 | || |||||||| Sbjct 234430 CGAATATCTGCAT 234418 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||| || ||||||||||| || | ||| || ||| | || ||||| || || || || || Sbjct 235065 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 235006 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || |||||||| || ||||| || | || ||||| ||| ||| || | || ||| Sbjct 235005 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCT-TGAATCTTGGCCTTCACGT 234947 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| ||||| | |||||| |||| || || || || ||||| | ||| |||| Sbjct 234946 TGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCA 234887 Query 34694 CAAAAATCTGCAT 34706 | || |||||||| Sbjct 234886 CGAATATCTGCAT 234874 >seq20 Length=1052065 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || ||| ||||| || ||||| || || | ||| ||||| Sbjct 925165 AGACGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGG 925224 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || || ||||| || || |||||||| || ||||| || | || ||| Sbjct 925225 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCC 925284 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | |||||| | || || || ||| || || | || Sbjct 925285 TTGTCTTGGATC-TTGGCTTTAACATTGTCGATGGTATCACTAGACTCGACATCAAGAGT 925343 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || ||||| || | || || ||||||||||||||| Sbjct 925344 AATAGTCTTACCCGTGAGGGTCTTAACAAAAATCTGCATG 925383 >seq3 Length=3052702 Score = 105 bits (116), Expect = 4e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | ||| |||||| ||||| |||||||| | || || || | || || Sbjct 340444 ACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCGAGAGTGCGTCCATCCTCC 340385 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || |||||||| || | |||||||| || || || | ||||| |||||| | Sbjct 340384 AGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGAATGCCCTCTTTGTCTTGG 340325 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 |||||| | || ||| || ||| ||||| | ||| || || | || || ||||| Sbjct 340324 ATCTTT-GCCTTCACGTTATCAATAGTGTCACTGGACTCGACATCTAATGTGATTGTTTT 340266 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || |||||||| || ||||| Sbjct 340265 ACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| ||||| || ||||| | ||||||||| | || || |||||||| || ||||| Sbjct 340199 CTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAA 340140 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | |||||| || || || || | ||||||||||| ||| || | ||| ||| Sbjct 340139 AATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTC-CTGAATCTTAGCTTTCACGT 340081 Query 34635 TA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 || ||| ||||| ||| || |||| || || || ||||| || || || || | Sbjct 340080 TATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTACCAGTCAATGTCTTGA 340021 Query 34694 CAAAAATCTGCAT 34706 |||| || ||||| Sbjct 340020 CAAATATTTGCAT 340008 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| ||||| || ||||| | || || || | ||||| || || || |||||||| Sbjct 339971 CTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAA 339912 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | ||| ||||| ||||| || | ||||| ||||| ||||| | || ||| Sbjct 339911 GATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATCTTA-GCCTTCACGT 339853 Query 34635 TAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 || ||| ||||| |||||| |||| || || ||||| ||||| | || || | Sbjct 339852 TATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAA 339793 Query 34694 CAAAAATCTGCATGTTG 34710 ||||||||||||| ||| Sbjct 339792 CAAAAATCTGCATATTG 339776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729293138640