Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq20 140 3e-28 seq5 132 4e-26 seq3 100 2e-16 >seq20 Length=1052065 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 ||||||||||| ||||| || || || || || ||| ||||||||||||| || || | Sbjct 925385 GCCATGCAGATTTTTGTTAAGACCCTCACGGGTAAGACTATTACTCTTGATGTCGAGTCT 925326 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 || | || || | || ||| || || |||||||| ||||| || || || ||| Sbjct 925325 AGTGATACCATCGACAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCGGAT 925266 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || |||||||| || | ||||||||| || ||||||| | || || |||| ||| Sbjct 925265 CAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGAACTCTTGCCGACTAC 925206 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || ||||| || ||| | || ||||| |||||| |||| ||||| Sbjct 925205 AACATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGTCTGCGTGGTGG 925156 >seq5 Length=2516746 Score = 132 bits (146), Expect = 4e-26 Identities = 170/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||| || || ||||| ||| | ||||| || || ||||| |||| Sbjct 234646 ATGCAGATCTTTGTAAAGACACTCACCGGAAAGACAATTACCCTGGATGTGGA---GTCC 234702 Query 27048 ---GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 ||| | ||||| | || || || |||||||| || ||||| ||||| || ||| Sbjct 234703 AGTGACACTATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATACCTCCGGAT 234762 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || |||||||| || | ||| || || || | || || | || || |||| ||| Sbjct 234763 CAGCAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCCGACTAC 234822 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| |||||||| || | || ||||| |||||||||| ||||| || Sbjct 234823 AACATTCAGAAGGAGTCCACTCTGCACTTGGTACTGCGTTTGCGAGGTGGTAT 234875 Score = 111 bits (122), Expect = 1e-19 Identities = 165/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || || ||||||||| |||| || || || ||||| |||| Sbjct 234418 ATGCAGATATTCGTGAAGACGCTTACCGGCAAGACTATCACGCTGGATGTGGA---GTCC 234474 Query 27048 ---GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 ||| | ||||| | || || || |||||||| || ||||| || || || ||| Sbjct 234475 AGTGACACCATTGACAACGTGAAGGCTAAGATTCAAGATAAGGAAGGTATTCCTCCGGAT 234534 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || |||||||| || | ||| || || || | || || | || || | || || Sbjct 234535 CAGCAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTAT 234594 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || ||||| || || || || || | |||||||| ||||| || Sbjct 234595 AACATTCAGAAAGAGTCTACTTTGCACTTAGTACTTCGTTTGCGTGGTGGTAT 234647 Score = 109 bits (120), Expect = 5e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || || ||||||||| |||| || || || ||||| |||| Sbjct 234874 ATGCAGATATTCGTGAAGACGCTTACCGGCAAGACTATCACGCTGGATGTGGA---GTCC 234930 Query 27048 ---GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 ||| | ||||| | || || || |||||||| || ||||| || || || ||| Sbjct 234931 AGTGACACCATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATTCCTCCGGAT 234990 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || |||||||| || | ||| || || || | || || | || || | || || Sbjct 234991 CAGCAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTAT 235050 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||| || ||||| || || || || || | |||||||| ||||| Sbjct 235051 AACATTCAGAAAGAGTCTACTTTGCACTTAGTACTTCGTTTGCGTGGTGG 235100 Score = 107 bits (118), Expect = 2e-18 Identities = 165/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || || || || ||||| ||| |||| || || || ||||| ||| Sbjct 233961 CATGCAGATATTCGTGAAGACACTCACCGGAAAGACTATCACCCTGGATGTGGA---GTC 234017 Query 27047 C---GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 | ||| | ||||| | || || || |||||||| || ||||| || || || || Sbjct 234018 CAGTGACACCATTGACAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATTCCTCCGGA 234077 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| |||||||| || | ||| || || || | || || | || || | || || Sbjct 234078 TCAGCAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGATGGGCGTACGCTTGCTGACTA 234137 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || ||||| || || || || || | |||||||| ||||| || Sbjct 234138 TAACATTCAGAAAGAGTCTACTTTGCACTTAGTACTTCGTTTGCGTGGTGGTAT 234191 >seq3 Length=3052702 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || ||| ||||||| || | || || | || || || |||| Sbjct 340236 ATGCAAATATTTGTGAAGACTTTGACCGGTAAAACAATCACATTAGATGTCGA---GTCC 340292 Query 27048 ---GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 ||| | ||||| | || || ||| || ||||||||||| ||||| || || ||| Sbjct 340293 AGTGACACTATTGATAACGTGAAGGCAAAGATCCAAGACAAAGAGGGCATTCCTCCTGAT 340352 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 |||||||| | || | ||||| || || |||| || | || | | ||||| Sbjct 340353 CAACAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGATGGACGCACTCTCGCTGATTAT 340412 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || ||||| |||||||| |||||||| ||||| Sbjct 340413 AATATTCAGAAGGAGTCCACCTTACACTTGGT 340444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917965081600