Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 seq20 87.8 1e-12 >seq3 Length=3052702 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 || ||||| |||||||| || ||||| || || ||| |||||| | ||||| || Sbjct 339777 AATATGCAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCT 339836 Query 27847 ACCGAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | ||| ||| | || || || || || |||||||| ||| |||| || Sbjct 339837 AGTGACACGATTGATAAC--GTGAAGGCTAAGATTCAGGACAAAGAGGGTATTCCTCCGG 339894 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||||| | || ||||||||||| || | || || | ||| | | |||||| Sbjct 339895 ATCAACAACGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATT 339954 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||| || || || ||| ||||||||| | ||| | |||||||||||||| Sbjct 339955 ACAATATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGG 340006 >seq20 Length=1052065 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| |||||||| || || || || || || |||||| |||||||||| | Sbjct 925382 ATGCAGATTTTTGTTAAGACCCTCACGGGTAAGACTATTACTCTTGATGTCGAGTCTAGT 925323 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || ||||| || ||| || || ||||| |||||| |||| ||| | Sbjct 925322 GATACCATCGACAAT--GTTAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCGGATC 925265 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTAC 27966 |||| || || || || ||||| || || |||| || | || | |||| |||| ||| Sbjct 925264 AGCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGAACTCTTG-CCGACTAC 925206 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||| || || ||| | || ||||| |||||| ||||||| || Sbjct 925205 AACATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGTCTGCGTGGTGG 925156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862053034160