Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq20 161 2e-34 seq3 154 3e-32 seq5 152 1e-31 >seq20 Length=1052065 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| ||||| || || |||||||| || || ||||| || | |||||||||||||| Sbjct 925179 GTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCTTCCAGCTG 925238 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||| |||||||| | || || || || || |||| ||||||||||| |||||||| Sbjct 925239 CTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCCTTGTCTTGGATCTT 925298 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || || |||||||| ||| || || || ||||| || ||||| ||||| Sbjct 925299 GGCTTTAACATTGTCGATGGTATCACTAGACTCGACATCAAGAGTAATAGTCTTACCCGT 925358 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| ||||| | |||||| Sbjct 925359 GAGGGTCTTAACAAAAATCTGCAT 925382 >seq3 Length=3052702 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || | ||| ||||| || || || || ||||| || || || | ||||||| Sbjct 339991 AGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCT 339932 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || |||||||| |||||||| || ||||||| || || |||||| Sbjct 339931 TCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCC 339872 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| || || |||||| || || || ||||| || || Sbjct 339871 TGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTT 339812 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||||||||| ||||| | |||||| || Sbjct 339811 TTTCCGGTGAGAGTCTTAACAAAAATCTGCATATT 339777 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | ||| | |||||||| || || || |||||||| || || || | ||| Sbjct 340451 TCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGCGAGAGTGCGTCC 340392 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| ||||||||||| || || || || ||||| ||||| |||||||||| || || || Sbjct 340391 ATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGGAATGCCCTCTTT 340332 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||||||| |||||||| || || |||||| | || || || | ||||| Sbjct 340331 GTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGACATCTAATGTGAT 340272 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | |||||| ||||| | ||||| Sbjct 340271 TGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || | ||| ||||| || || || || ||||| ||||| || | ||||| Sbjct 340219 AGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCC 340160 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || || ||||| || || || |||||||||| || ||||||||| Sbjct 340159 TCTAGTTGTTTTCCAGCAAAAATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCC 340100 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||||||| || || |||||| ||||| || | || || ||| Sbjct 340099 TGAATCTTAGCTTTCACGTTATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTC 340040 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | ||||| Sbjct 340039 TTACCAGTCAATGTCTTGACAAATATTTGCAT 340008 >seq5 Length=2516746 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||||||||| || || |||||||| || ||||| || | ||||| Sbjct 234401 AGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCAAGCGTACGCCCATCC 234342 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || ||||| || | || || || || ||||||| |||||||| || Sbjct 234341 TCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCT 234282 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || || |||||| | || || || || || || ||| Sbjct 234281 TGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACATCCAGGGTAATTGTC 234222 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||||||||| | |||||| Sbjct 234221 TTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||||||||| || || ||||| || || ||||| || | ||||| Sbjct 234857 AGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGCGTACGCCCATCC 234798 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || ||||| || | || || || || ||||| | |||||||| || Sbjct 234797 TCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGTATACCTTCCTTATCT 234738 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| || || |||||| | || || || || || || ||| Sbjct 234737 TGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCACATCCAGGGTAATTGTC 234678 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||||||||| | |||||| Sbjct 234677 TTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150811869200