Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq3 136 3e-27 seq20 127 1e-24 >seq3 Length=3052702 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| ||||| || ||||| |||||||| || ||||| || || || || Sbjct 339777 AATATGCAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCT 339836 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| |||| | | || || ||| |||||||| ||| | || || ||| Sbjct 339837 AGTGACACGATTGATAACGTGAAGGCTAAGATTCAGGACAAAGAGGGTATTCCTCCGGAT 339896 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| ||| | || |||||||| || || || ||||| | ||| ||| | | ||||||| Sbjct 339897 CAACAACGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATTAC 339956 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || ||||| || || ||| ||||| | | ||||| || || Sbjct 339957 AATATTCAGAAGGAGTCAACTTTGCATCTAGTTCTTCGTTTGCGTGGCGG 340006 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || | || || ||||| ||||| | || || || |||| Sbjct 340236 ATGCAAATATTTGTGAAGACTTTGACCGGTAAAACAATCACATTAGATGTCGAGTCCAGT 340295 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || ||| || |||||||| || | || || |||||| Sbjct 340296 GACACTATTGATAACGTGAAGGCAAAGATCCAAGACAAAGAGGGCATTCCTCCTGATCAA 340355 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || |||||||| || || ||||| || | ||||||| | | ||||| || Sbjct 340356 CAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGATGGACGCACTCTCGCTGATTATAAT 340415 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATCA 23841 || || || |||||||| ||||| || || | || || |||| ||| || Sbjct 340416 ATTCAGAAGGAGTCCACCTTACACTTGGTACTCAGATTAAGAGGTGGAGCA 340466 >seq20 Length=1052065 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| ||||||||||| || || || ||||| || || || || | Sbjct 925382 ATGCAGATTTTTGTTAAGACCCTCACGGGTAAGACTATTACTCTTGATGTCGAGTCTAGT 925323 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| ||||| | || || ||||| |||||| | || || ||||| Sbjct 925322 GATACCATCGACAATGTTAAAGC-CAAGATCCAAGACAAGGAAGGTATTCCCCCGGATCA 925264 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||||| || || |||||||| || |||||||| | || ||| | | ||| ||||| Sbjct 925263 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGAACTCTTGCCGACTACAA 925204 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || || ||||| | || || || || | |||| || ||| Sbjct 925203 CATCCAGAAGGAATCCACCCTTCACTTGGTGTTGCGTCTGCGTGGTGGA 925155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009270440640