Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq20 129 1e-24 seq3 107 4e-18 seq5 96.9 8e-15 >seq20 Length=1052065 Score = 129 bits (142), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || || ||||||||||| ||||| | ||||| |||||||| | Sbjct 925176 CAAG-TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCTTCCA 925234 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| | | |||||| |||| | || |||||||| ||||| | Sbjct 925235 GCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCCTTGTCTTGGA 925294 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| | || | | | || | ||| || |||||||||||||| || | Sbjct 925295 TCTTGGCTTTAACATTGTCGATGGTATCACTAGACTCGACATCAAGAGTAATAGTCTTAC 925354 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||| ||||| || || | |||||| Sbjct 925355 CCGTGAGGGTCTTAACAAAAATCTGCAT 925382 >seq3 Length=3052702 Score = 107 bits (118), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| | ||| ||||| || || || ||||||||||| | ||| | |||||| Sbjct 339991 AGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCT 339932 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||| |||||||| | || || |||| | || || || || | Sbjct 339931 TCGAGCTGCTTT--CCGGCAAAGATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGT 339874 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || || || | || | |||| | ||| || || |||||||||| Sbjct 339873 CCTGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAG 339814 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| || ||||||||||| || || | |||||| || Sbjct 339813 TTTTTCCGGTGAGAGTCTTAACAAAAATCTGCATATT 339777 >seq5 Length=2516746 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTC 151964 |||||||||||| || ||||| || || || | || | |||||| || || ||||| Sbjct 234159 AGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTT-- 234102 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 || ||||| || | | |||||| |||| | || |||||||| |||||||| || Sbjct 234101 CCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCC 234042 Query 152025 TTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGA 152082 || || | || | | ||| ||| | ||| || || || || ||||| || || |||| Sbjct 234041 TTCACGTTGTCAATGGTGTCACTGGA--CTCCACATCCAGGGTGATAGTCTTTCCGGTGA 233984 Query 152083 GAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| | |||||| Sbjct 233983 GTGTCTTCACGAATATCTGCAT 233962 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTC 151964 |||||||||||| || ||||| || || || | || | |||||| || || ||||| Sbjct 234615 AGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTT-- 234558 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 || ||||| || | | |||||| |||| | || |||||||| |||||||| || Sbjct 234557 CCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTAGCC 234498 Query 152025 TTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGA 152082 || || | || | | ||| ||| | ||| || || || || ||||| ||||| || | Sbjct 234497 TTCACGTTGTCAATGGTGTCACTGGA--CTCCACATCCAGCGTGATAGTCTTGCCGGTAA 234440 Query 152083 GAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| | |||||| Sbjct 234439 GCGTCTTCACGAATATCTGCAT 234418 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTC 151964 |||||||||||| || ||||| || || || | || | |||||| || || ||||| Sbjct 235071 AGTAGACTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTT-- 235014 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 || ||||| || | | |||||| |||| | || |||||||| |||||||| || Sbjct 235013 CCAGCGAAAATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCC 234954 Query 152025 TTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGA 152082 || || | || | | ||| ||| | ||| || || || || ||||| ||||| || | Sbjct 234953 TTCACGTTGTCAATGGTGTCACTGGA--CTCCACATCCAGCGTGATAGTCTTGCCGGTAA 234896 Query 152083 GAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| | |||||| Sbjct 234895 GCGTCTTCACGAATATCTGCAT 234874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819617333680