Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq20 149 5e-31 seq5 141 7e-29 seq3 107 1e-18 >seq20 Length=1052065 Score = 149 bits (164), Expect = 5e-31 Identities = 175/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| || | ||| | |||||||| |||||| ||| ||||| ||||||||||| ||||| Sbjct 925155 TCCACCACGCAGACGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGC 925214 Query 44170 --GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 ||||| || | || ||||||||||| ||||| |||||||||||||||||||| | Sbjct 925215 AAGAGTT--CGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGG 925272 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTC 44286 || | ||||||||| || ||||| |||| || || | ||||| || || || Sbjct 925273 GGAATACCTTCCTTGTCTTGGATCTT-GGCTTTAACATTGTCGATGGTATCACTAGACTC 925331 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | ||||| ||||| |||||||||||||| || || || |||||| Sbjct 925332 GACATCAAGAGTAATAGTCTTACCCGTGAGGGTCTTAACAAAAATCTGCATG 925383 >seq5 Length=2516746 Score = 141 bits (156), Expect = 7e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || | || |||| ||| || ||| |||||| || |||||||| || Sbjct 234876 CATACCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTC 234817 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||| || ||| | || || |||||||| || || || ||||||||||||||||| | Sbjct 234816 GGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGG 234757 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||||||| || ||||| ||||| | | || ||||| ||| || Sbjct 234756 AGGTATACCTTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTC 234697 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| ||||| |||||||| ||||| ||||| || ||||| ||||| Sbjct 234696 CACATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 138 bits (152), Expect = 8e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || | || |||| ||| || ||| |||||| || ||||| || || Sbjct 234420 CATACCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTC 234361 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||| || ||| | || || |||||||| || || || ||||||||||||||||| | Sbjct 234360 GGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGG 234301 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||||||| || ||||| ||||| | | || ||||| ||| || Sbjct 234300 AGGAATACCTTCCTTATCTTGGATCTTAGCCTTCACGTTGTCAATAGTGTCACTGGACTC 234241 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||| ||||| |||||||| ||||| ||||| || ||||| ||||| Sbjct 234240 CACATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 129 bits (142), Expect = 4e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || || ||||| || || || || ||| | || || |||||||| || || || Sbjct 234153 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 234094 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||||||||||||||| | ||| | ||||||||| || ||||| ||||| | Sbjct 234093 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTCACGTT 234034 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| ||| ||||| |||| || || |||||||| ||||| |||||||| Sbjct 234033 GTCAATGGTGTCACTGGACTCCACATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCAC 233974 Query 44326 GAAGATTTGCATGATG 44341 ||| || ||||||||| Sbjct 233973 GAATATCTGCATGATG 233958 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || || ||||| || || || || ||| | || || |||||||| || || || Sbjct 234609 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 234550 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||||||||||||||| | ||| | ||||||||| || ||||| ||||| | Sbjct 234549 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACGTT 234490 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| ||| ||||| |||| ||| || ||||| || || || |||||||| Sbjct 234489 GTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCAC 234430 Query 44326 GAAGATTTGCAT 44337 ||| || ||||| Sbjct 234429 GAATATCTGCAT 234418 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || || ||||| || || || || ||| | || || |||||||| || || || Sbjct 235065 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 235006 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||||||||||||||| | ||| | ||||||||| || ||||| ||||| | Sbjct 235005 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTATCTTGAATCTTGGCCTTCACGTT 234946 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| ||| ||||| |||| ||| || ||||| || || || |||||||| Sbjct 234945 GTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCAC 234886 Query 44326 GAAGATTTGCAT 44337 ||| || ||||| Sbjct 234885 GAATATCTGCAT 234874 >seq3 Length=3052702 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || || |||||||||||||| || | || || |||||||| |||||||| Sbjct 339971 CTCCTTCTGAATATTGTAATCGGCGAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAA 339912 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| || ||||| | ||| | ||| || || ||| ||||| ||||| | Sbjct 339911 GATAAGACGTTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATCTTAGCCTTCACGTT 339852 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| || ||||| |||| ||||| || ||||| ||||| ||||| || Sbjct 339851 ATCAATCGTGTCACTAGACTCCACATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAAC 339792 Query 44326 GAAGATTTGCAT 44337 || || ||||| Sbjct 339791 AAAAATCTGCAT 339780 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| ||||| | ||| | |||| ||| | ||| |||||| || || || ||||| || Sbjct 340463 TCCACCTCTTAATCTGAGTACCAAGTGTAAGGTGGACTCCTTCTGAATATTATAATCAGC 340404 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| ||| | || ||||||||||| |||||||| || | ||||| ||||| | ||| Sbjct 340403 GAGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGTTGATCAGGAGG 340344 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | || || || || ||||| ||||| | | || ||||| ||| || || Sbjct 340343 AATGCCCTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATAGTGTCACTGGACTCGAC 340284 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || || || || || | |||||||| || |||||||| Sbjct 340283 ATCTAATGTGATTGTTTTACCGGTCAAAGTCTTCACAAATATTTGCAT 340236 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || || ||||||||||| ||| || | || || || || || || ||||| Sbjct 340199 CTCCTTCTGAATATTGTAATCGGCAAGTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAA 340140 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | |||||||||||| | ||| | || ||||| ||| ||||| |||| | || Sbjct 340139 AATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATCTT-AGCTTTCACGT 340081 Query 44266 T-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || ||||| || || || |||| ||||| ||||| || || | ||||| | Sbjct 340080 TATCAATCGTGTCACTAGACTCAACGTCCAATGTAATGGTCTTACCAGTCAATGTCTTGA 340021 Query 44325 CGAAGATTTGCAT 44337 | || |||||||| Sbjct 340020 CAAATATTTGCAT 340008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990049009360