Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3 167 6e-36 seq20 123 6e-23 seq2 89.7 1e-12 >seq3 Length=3052702 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || |||||||| |||||||| || || || || ||||| ||| Sbjct 339783 CAGATTTTTGTTAAGACTCTCACCGGAAAAACTATTACTCTGGATGTGGAGTCTAGTGAC 339842 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||||||||||||||| || || |||||||| || ||| Sbjct 339843 ACGATTGATAACGTGAAGGCTAAGATTCAGGACAAAGAGGGTATTCCTCCGGATCAACAA 339902 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| |||||||| ||||||||||||||| | ||||| |||||||| || | Sbjct 339903 CGTCTTATCTTTGCCGGAAAGCAGCTCGAAGATGGACGTACTCTCGCCGATTACAATATT 339962 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || ||||| ||||||| ||| Sbjct 339963 CAGAAGGAGTCAACTTTGCATCTAGTT 339989 Score = 113 bits (124), Expect = 1e-19 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| || || ||||| ||| |||||||||||||| || || || ||||| || ||| Sbjct 340068 GACACGATTGATAACGTGAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCAG 340127 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || ||||| || || |||||||| || || ||||| | || ||||||||||| || Sbjct 340128 CAGCGTCTTATTTTTGCTGGAAAACAACTAGAGGATGGCCGAACACTTGCCGATTACAAT 340187 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTT 178130 | || || || ||||| ||||||| ||| Sbjct 340188 ATTCAGAAGGAGTCAACTTTGCATCTAGTT 340217 >seq20 Length=1052065 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || || || || || || || || || || Sbjct 925379 CAGATTTTTGTTAAGACCCTCACGGGTAAGACTATTACTCTTGATGTCGAGTCTAGTGAT 925320 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || ||| ||||| || ||||| ||||| || || ||||| ||||| Sbjct 925319 ACCATCGACAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATTCCCCCGGATCAGCAG 925260 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || ||||| |||||||| | ||||||||||| || ||| || Sbjct 925259 CGTTTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGAACTCTTGCCGACTACAACATC 925200 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 925199 CAGAAGGAATCCACCCTTCA-CTTG 925176 >seq2 Length=3757272 Score = 89.7 bits (98), Expect = 1e-12 Identities = 87/111 (78%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 178018 AAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATG 178077 || |||| ||||| ||||| ||||| || | || || || ||||| ||||| ||||||| Sbjct 390318 AAAAAGGTATCCCCCCGGATCAGCAGAGATTGATTTTTGCTGGAAAGCAGCTAGAAGATG 390259 Query 178078 GAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 | | ||||||||||| |||||| |||| || ||||| || || || |||| Sbjct 390258 GCCGCACTCTTGCCGACTATAACATCCAGAAGGAATCTACCCTTCA-CTTG 390209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729966175520