Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Creolimax_20fragrantissima_20[genbank_20GCA_5F002024145.1_202017-03- 09] 80 sequences; 44,807,953 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq20 134 1e-26 seq5 129 5e-25 seq3 127 2e-24 >seq20 Length=1052065 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| ||||||| || || ||| |||||||| ||||| ||||| Sbjct 925152 ACCTCCACCACGCAGACGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTC 925211 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || || || | || || ||||||||||||||||| |||| ||||| || |||| Sbjct 925212 GGCAAGAGTTCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGG 925271 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810 ||||| | ||||||| | || | || |||| ||| | | | || || || |||| Sbjct 925272 GGGAATACCTTCCTTGT-CTTGGATCTTGGCTTTAACATTGTCGATGGTATCACTAGACT 925330 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || || | || || || |||||||| || ||||| || |||||||||||| Sbjct 925331 CGACATCAAGAGTAATAGTCTTACCCGTGAGGGTCTTAACAAAAATCTGCATG 925383 >seq5 Length=2516746 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || | ||| | |||| ||||| ||| ||||||||||||||||||||||| Sbjct 234416 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTATAGTCGGCA 234357 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || ||| | || || |||||||| || ||||| |||| ||||| || |||| ||| Sbjct 234356 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGA 234297 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| || ||| || |||| ||| | | | |||||| || |||||||| Sbjct 234296 ATACCTTCCTTATCTTGGATCTTAGCCTTC-ACGTTGTCAATAGTGTCACTGGACTCCAC 234238 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || || || |||||||| || |||||||| Sbjct 234237 ATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234190 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || | ||| | |||| ||||| ||| ||||||||||||||| ||||||| Sbjct 234872 CCACCTCGCAAACGCAGTACCAAGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCA 234813 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || ||| | || || |||||||| || ||||| |||| ||||| || |||| || Sbjct 234812 AGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGATCCGGAGGT 234753 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| | | ||| | || || | ||| | | | |||||| || |||||||| Sbjct 234752 ATACCTTCCTTAT-CTTGAATCTTGGCCTTCACGTTGTCAATAGTGTCACTGGACTCCAC 234694 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || || || |||||||| || |||||||| Sbjct 234693 ATCCAGGGTAATTGTCTTTCCGGTGAGTGTCTTTACAAAGATCTGCAT 234646 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||| ||||||||||||||||| | || || ||| | || || |||||||| || ||||| Sbjct 234609 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 234550 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| ||||| || |||| |||| | ||||| | | ||| | || || | ||| Sbjct 234549 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTAT-CTTGAATCTTAGCCTTCACGT 234491 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| || |||||||| |||| ||| || || || || || |||||||| | Sbjct 234490 TGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCA 234431 Query 41850 CGAAAATCTGCAT 41862 |||| |||||||| Sbjct 234430 CGAATATCTGCAT 234418 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||| ||||||||||||||||| | || || ||| | || || |||||||| || ||||| Sbjct 235065 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 235006 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| ||||| || |||| |||| | ||||| | | ||| | || || | ||| Sbjct 235005 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTAT-CTTGAATCTTGGCCTTCACGT 234947 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| || |||||||| |||| ||| || || || || || |||||||| | Sbjct 234946 TGTCAATGGTGTCACTGGACTCCACATCCAGCGTGATAGTCTTGCCGGTAAGCGTCTTCA 234887 Query 41850 CGAAAATCTGCAT 41862 |||| |||||||| Sbjct 234886 CGAATATCTGCAT 234874 Score = 109 bits (120), Expect = 5e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||| ||||||||||||||||| | || || ||| | || || |||||||| || ||||| Sbjct 234153 CTCTTTCTGAATGTTATAGTCAGCAAGCGTACGCCCATCCTCAAGCTGCTTTCCAGCGAA 234094 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| ||||| || |||| |||| | ||||| | | ||| | || || | ||| Sbjct 234093 AATCAAACGCTGCTGATCCGGAGGAATACCTTCCTTAT-CTTGAATCTTGGCCTTCACGT 234035 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| || |||||||| |||| || || || || || || || ||||| | Sbjct 234034 TGTCAATGGTGTCACTGGACTCCACATCCAGGGTGATAGTCTTTCCGGTGAGTGTCTTCA 233975 Query 41850 CGAAAATCTGCATG 41863 |||| ||||||||| Sbjct 233974 CGAATATCTGCATG 233961 >seq3 Length=3052702 Score = 127 bits (140), Expect = 2e-24 Identities = 170/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || | ||| | || ||||||| || |||||||||||| || || |||| | Sbjct 340006 CCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCG 339947 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| ||||| || || || || ||||| |||| ||| Sbjct 339946 AGAGTACGTCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGTTGATCCGGAGGA 339887 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| |||||| ||| | || || | ||| | | ||||| || |||||||| Sbjct 339886 ATACCCTCTTTGTCC-TGAATCTTAGCCTTCACGTTATCAATCGTGTCACTAGACTCCAC 339828 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATC 41868 |||| || || ||||| || || || ||||| || ||||||||||| || || Sbjct 339827 ATCCAGAGTAATAGTTTTTCCGGTGAGAGTCTTAACAAAAATCTGCATATTGTC 339774 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||||||||| ||||| || | ||| ||||| | || || |||||||| ||||| || Sbjct 340427 CTCCTTCTGAATATTATAATCAGCGAGAGTGCGTCCATCCTCCAGCTGCTTTCCGGCAAA 340368 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || ||||||||||| || | |||| || ||| ||||| ||| ||| |||| ||| Sbjct 340367 AATGAGGCGCTGTTGATCAGGAGGAATGCCCTCTTTGTCTTGGATCTTTGCCTTC-ACGT 340309 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | |||||| || ||||| || || | || || |||||||| |||| ||||| | Sbjct 340308 TATCAATAGTGTCACTGGACTCGACATCTAATGTGATTGTTTTACCGGTCAAAGTCTTCA 340249 Query 41850 CGAAAATCTGCAT 41862 | || || ||||| Sbjct 340248 CAAATATTTGCAT 340236 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || | ||| | || ||||||| || |||||||||||| || || |||| Sbjct 340234 CCGCCACGCAAACGAAGAACTAGATGCAAAGTTGACTCCTTCTGAATATTGTAATCGGCA 340175 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || || || || || || || || || ||||| || || | ||| Sbjct 340174 AGTGTTCGGCCATCCTCTAGTTGTTTTCCAGCAAAAATAAGACGCTGCTGATCAGGAGGA 340115 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || |||| ||| | | ||||| || ||||| || Sbjct 340114 ATGCCCTCCTTGTCC-TGAATCTTAGCTTTCACGTTATCAATCGTGTCACTAGACTCAAC 340056 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || ||||| |||| ||||| || || || ||||| Sbjct 340055 GTCCAATGTAATGGTCTTACCAGTCAATGTCTTGACAAATATTTGCAT 340008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303537696000