Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1059 187 4e-42 >seq1059 Length=4692 Score = 187 bits (206), Expect = 4e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| ||||||| | || |||||||| || ||| | || ||||| | Sbjct 2125 AATGCAAATCTTTGTAAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAATCTTC 2184 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| |||| | ||| ||||| ||||| |||||||| || ||||||||||| Sbjct 2185 TGATACTATTGATAATGTTAAAGCCAAAATCCAAGACAAAGAAGGAATCCCACCTGATCA 2244 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | |||||||||||||| ||||| || ||| | |||| ||| |||||||| Sbjct 2245 ACAAAGATTGATTTTTGCAGGAAAGCAATTGGAAGATGGAAGAACTTTATCTGATTATAA 2304 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 |||||| || |||||||| |||||||||||| | || | || ||||| Sbjct 2305 TATTCAGAAGGAATCAACATTGCATTTGGTTCTTCGCCTTCGTGGTGG 2352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755345259593600