Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3694 120 3e-22 >seq3694 Length=8734 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | |||||||| || || |||||||| ||| | ||| || ||| || Sbjct 3752 CACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTC 3693 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| ||||| || ||||||||||| || || ||||||||| Sbjct 3692 GAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTG 3633 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||| || | | || ||||||| ||| | || || Sbjct 3632 GATCTTAGCCTTGACGTTGTCGATGGTATCGGCGGGGTCAACCTCGAGGGTGATGGTCTT 3573 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| || || || || || ||||||||||||||| Sbjct 3572 GCCCGTGAGGGTCTTCACGAAAATCTGCATGGCT 3539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433768395739084