Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3694 96.9 3e-15 >seq3694 Length=8734 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| || || ||||| || |||||| |||| ||||| || | Sbjct 3542 CATGCAGATTTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGACCCCGC 3601 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | ||||| | || ||||||||||| | || ||||| || Sbjct 3602 CGATACCATCGACAACGTCAAGGCTAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCA 3661 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || ||||| ||||| ||| | ||||| ||| | ||| || || Sbjct 3662 ACAACGTCTTATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTCTTTCCGACTACAA 3721 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || ||||| || || || Sbjct 3722 CATCCAGAAGGAGTCTACCCTTCACCTTGTGCT 3754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445701056217840