Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1059 109 4e-19 >seq1059 Length=4692 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| | || || || || || || || ||||| || | |||| | ||||| Sbjct 2335 AACCAAATGCAATGTTGATTCCTTCTGAATATTATAATCAGATAAAGTTCTTCCATCTTC 2276 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 ||||| || || || | ||||| | |||||| || ||| |||||||||||||| Sbjct 2275 CAATTGCTTTCCTGCAAAAATCAATCTTTGTTGATCAGGTGGGATTCCTTCTTTGTCTTG 2216 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 |||||| || ||| | || || ||||| | ||| || || || ||||||||||| Sbjct 2215 GATTTTGGCTTTAACATTATCAATAGTATCAGAAGATTCAACTTCCAAAGTAATGGTTTT 2156 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| || |||||||| |||||||| Sbjct 2155 GCCAGTCAAGGTCTTTACAAAGATTTGCAT 2126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362127436330107